Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste4g00462 | TTTTGTTTCTTCTTCTTCTTCTGCTTCTCTTCTGTTTCTTCTTCAATCTTGCTCCTGCTCTTGCTTTTAGTCAAAGGAAGTAACCATAGCCACTTTGCTTTTGTGAGCTCAAAGAGGAAGTTCCACTATCATCATCCAGGTGACATGAACATCATGATGCAAAACTTAGTAGAGAGACTAAGACTTCTCGTAGGTTTGAACGGATGGGACTACTGCATCTACTGGAAATTGAGTGAAGACCAAAGGTTTCTTGAGTGGTTGGGATGCTGTTGTGCTGGCACTGAAGCCAATCAAAATCCTGGGGAAGAACATCTTTTCCCTGTCTCTTCATGCAGGGATACCACTTATCCACACCCGAGAACAAAGTCCTGTGATCTTCTTTCCCAGCTTTCCACTTCCATACCCATAGACAATTCTGGGCTTCATGCACAGACCCTGTTAACAAACCAGCCCAATTGGGTGAACTATTCCAATAGCTTAGATCCTAGTAGCATTTTGGAAGAAACAATTGGGACCCAGGTTTTGATTTCAGTGCCAGGTGGACTGGTTGAGCTGTTTGTAACCAAACAAGTAGCTGAAGATGATCAAGTGATAGATTTTGTGACAAGCCAGTGCATTGAAGCGGTGAACCACCCACTGAGCTTCAACATTGACGTAAATTCAATGCAATCAAACCCACTTTTGGGTGATGAAAAGGAAGGGAACAACCAGTTCGAGCCTTCAGAACATGTCATCAGTATGGACCACCAGCGCATTGGTCTGTGCAGTTCTCCGCTGGACTTGATGCAACAGTTCAACTACAACCAGCAGAACAGAATGAAGAGCGATGGCTTCTCGGAAGGTTCATTCCTGCATGAGAAGCAAACGAACCCAGAAGAAGAGGAGCAAGACACCTATCAGAAAAGCCTCATGGGAACGGATCCACAAGCAAAAGAGAAGCAAGAAGAGGAGAAGGAGTTGCTGAAACACGCAGTTGGTAGATCAGATTCAATGTCAGATTGCAGTGACCAGAACGAAGAAGAGGAAGATGGAAAGTATAGGAGGAGGAATGGAAAAGGGAACCAATCGAAGAACCTTGTAGCTGAGAGGAAGAGGAGGAAGAAGCTGAATGACAGGTTATACAACCTTCGTTCTTTGGTTCCAAGGATCTCTAAGCTGGATAGGGCCTCCATTCTGGGAGATGCCATTGAGTTTGTGAAGGATTTGCAGAAGCAAGTGAAAGAGCTCCAAGATGAGCTTGAGGAGAATGCAGACACCGAAAGTAACTGCATCAATGGGAATAATAATAATAATAATCAATATGTAGGTGACGCTGAACAAGGTAAGGCTCAAACTGTGGGGACATCGGAGAATGGCTATGTCTATGTCTCAAAACAAAAGCAGGAAGATGTCATTGACAAGCAGACCCAGCAGATGGAGCCACAGGTGGAAGTGGCTCTCATTGATGGGAATGAGTATTTTGTCAAGGTGTTTTGTGAGCACAGGCCTGGTGGCTTTGTCAAGCTCATGGAAGCCTTTAACACTATCGGCATGGATGTAGTCCATGCCACGGTTACAAGCCACAAGGGCCTCGTTTCCAATGTTTTTAAAGTAGAAAAAAAGGACACTGAAACTGTTGAGGCTGAAGATCTAAGAGACTCACTGCTGGAGCTTACGCGGAACCGTTATAGAGGATGGACTCATGAGATGACACCAACGTCAGAAAATGTTTTGGCCAAGGACCAAATTCAACTCCACAACCACCACATAGGTGCCTACTCACACCAATTTCATACT | 1776 | 0.4476 | FCFFFFFCFSSVSSSILLLLLLLVKGSNHSHFAFVSSKRKFHYHHPGDMNIMMQNLVERLRLLVGLNGWDYCIYWKLSEDQRFLEWLGCCCAGTEANQNPGEEHLFPVSSCRDTTYPHPRTKSCDLLSQLSTSIPIDNSGLHAQTLLTNQPNWVNYSNSLDPSSILEETIGTQVLISVPGGLVELFVTKQVAEDDQVIDFVTSQCIEAVNHPLSFNIDVNSMQSNPLLGDEKEGNNQFEPSEHVISMDHQRIGLCSSPLDLMQQFNYNQQNRMKSDGFSEGSFLHEKQTNPEEEEQDTYQKSLMGTDPQAKEKQEEEKELLKHAVGRSDSMSDCSDQNEEEEDGKYRRRNGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEFVKDLQKQVKELQDELEENADTESNCINGNNNNNNQYVGDAEQGKAQTVGTSENGYVYVSKQKQEDVIDKQTQQMEPQVEVALIDGNEYFVKVFCEHRPGGFVKLMEAFNTIGMDVVHATVTSHKGLVSNVFKVEKKDTETVEAEDLRDSLLELTRNRYRGWTHEMTPTSENVLAKDQIQLHNHHIGAYSHQFHT | 592 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste4g00462 | 592 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 261 | 553 | - | - | |
Pste4g00462 | 592 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 353 | 402 | IPR011598 | GO:0046983 | |
Pste4g00462 | 592 | ProSiteProfiles | ACT domain profile. | 487 | 559 | IPR002912 | - | |
Pste4g00462 | 592 | MobiDBLite | consensus disorder prediction | 286 | 300 | - | - | |
Pste4g00462 | 592 | Pfam | Helix-loop-helix DNA-binding domain | 360 | 403 | IPR011598 | GO:0046983 | |
Pste4g00462 | 592 | SMART | finulus | 359 | 408 | IPR011598 | GO:0046983 | |
Pste4g00462 | 592 | MobiDBLite | consensus disorder prediction | 272 | 364 | - | - | |
Pste4g00462 | 592 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 356 | 415 | IPR036638 | GO:0046983 | |
Pste4g00462 | 592 | Gene3D | - | 338 | 418 | IPR036638 | GO:0046983 | |
Pste4g00462 | 592 | CDD | ACT_UUR-ACR-like | 488 | 551 | - | - | |
Pste4g00462 | 592 | MobiDBLite | consensus disorder prediction | 308 | 326 | - | - | |
Pste4g00462 | 592 | Coils | Coil | 392 | 422 | - | - | |
Pste4g00462 | 592 | CDD | bHLH_AtAMS_like | 356 | 421 | - | - | |
Pste4g00462 | 592 | Pfam | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 57 | 203 | IPR025610 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste4g00462 | Pste-Chr4 | 3504579 | 3507331 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste4g00462 | 53 | 566 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G16910 | 47.290 | 5.54e-140 | 417 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Pste4g00462 | bHLH-MYC_N | 9.2e-19 | CL0161 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Pste4g00462 | 4 | 3504579 | 3507331 | Pste4g00462 | 4 | 3504579 | 3507331 | ECH |