Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g00407 | ATGTCGGGATTGGAACTCGTACCCATAGGTACAATTTTGACAGTGGTAACTAATCAAGTCTTGAAAACAGCTCAAGCAGCATCTGATGTTCTTGTTGGTAAAGAAAGTTTCAAGGCCCTTTCAAAACATCTACTTGATATCGAGCCAGTGCTAAAGGAATTACAGCTTCAAGAATTGAATGACTCTCAAGCTGCAAGAATTGCTCTGAAGTCTCTTGAAGATGACGTTAAAAAGGCAAATAATTTGGTTGACAAGTATAGGAACCGTGGCCGTTTTTACTTGCTGATTAAGTGCCGATCAATAGTTGAGGAGGTTGAACAAGTCACAAGGGATATCGGAAAGTCATTAGCTGCATTGTCTATTGCAAACGCTGAAGTTCTATCCAGAATATCTGATCAGATCAATAGACTACAAAGTGAGATGCAAAGGGAGAAGTTTGAGGCTTCACAATCTCAGATTCAAATTGTTGACAAGTTGAACCAGGGACTTAGAGAACAGAAACTAGATCAGGCTTTTGCAAATGACATATTAGAGGATATAGCAAGGGCAGTTGGGGTGCCAGTGGAACCCTCAGAGATAAGCAAAGAGTTGGCCAGCATTAGGAAGGAAAAAGAAGAAGCTTCCATCAGGAAAGAAAGAGCTGAATGTGTTCTTTTGGAGCAGATAATTCAGTTACTGTCTCGAGCTGATGCAGCAAGGGATTATGAAGAAGTGGAGAGGCAGTACTTTGAAAGGGTTAAGGTGATCGAGAGATATGATTCAAGGGAAAAATATATCCCCCCACTCAATCCTTTCCTTTGTTCTATAACTGGAGCTGTTATGGAAGATCCTGTCAGTCTTTGCACTGGTACTACATGTGAGAGATCTGCTATTGAAGCTTGGTTTTATGATGGCAACAGGACAGATCCGGAAACTAAAGAGATTCTAGAAGATACTACCTTGAGGTCTAACATTCCACTAAGGCAGTCTATTGAAGAGTGGAGAGAACTTAATTACTGTCTTGTAATAAGGTCGATAAGGGAAAATTTATTATCATACTCTGACCTGCAAGAATCCCTGAGCCAAATGCAGGCTCTAGTAAGAGAGAATTCTATTAACAAGGATTGGATTTCTATAGGAAAGGTGACTGATAATGTTATCTCTATTCTTGGGAGCTTTGATGACAGAGACGTGAAGATGAAGGTTTTGATAACTTTGAAGGATGCTGTAGAGGGGAATACAAGAAACAAGGAGAAAGTGGCTGAATCTCAAGGATGGGATCACATTATTTCCTGCTTAGGGAGTGACTCTAGCATTTCAAAGGCAGCAATCGATTTGCTATATGAGTTGCTTCAAGAACAATCTGGTTGGAATCAATATCTCTGCAAAAAGCTTTCTGAAAATCATACTGCAGTTCGATCCCTTGTTGCCCTTCTAAAGAATCATGTCAACCATTCTGCTGAGGTTGCAGAAAAGATTTTGATGAAGCTTTTTGAACTAAGTGAGAAAACCATTATTATTGCAGCTAATTTTGGCTGGTATAAACCACTTGTTGATCGCATGATTCAAGGACAAGATTCAGGCATATCAATGACAAAAGCCATAGTTAATTTGGAGTTGAATGATTCAAACTTGAAACTCCTTGGCAAGGAAGGAGCTATACCTCCTTTGCTAGAAATGCTGTTGGGCAGTATTGAATCAAAGGACTTGTCATTGTCAGCCCTGGTTAAATTAGCTGGATCCCATGCCAATAAGGGAATTATCGCTGCATCTGGAGGAGTTCCTCTTATTCTAGATTTAATGTTCTCTCCTCGGTCACAGGCATTCATTATCATTAAATGTTCTGAAATCATTGAGAAGCTTTCCTCAGGCGGTGATGGAATTGATTTCTTTGTTGATGGAGAAGGGAAACAACTTGAGTTAGATTCCATCATCACCAATTTGCTAACTTTGCAGCAGAATGCCATCTCAGGTCACAAAATCCGCAAGCCTGCACTATGTGCACTTATTGGCATTTGCAAGTTTGAGACTGGTTTGGTTAAGAAAGCAATTCTTGCAGCCAATGGTGTATCTCTAATTCTTCCACTTCTAGATGATTCTGACTCAGAAATCAGGGAGACTTCCATAATTCTGCTCTTTCTTTTCTCTCAACACGAGCCAGAAGGAGTAGTTGAATACCTCTTCAAGCCTAGAAGGCTTGAAGCCTTGATTGGATTTCTTGAGAATGAAGAGAATGATAATGTACAGATGGCTGCTGCTGGTTTAGTGGCTAACCTGCCAAAATCAGAACGGGAACTCACTATGAAGTTGATTGGGCTGGGTGGACTGGATGCAATCATAAGCATTTTGAAAACTGGCAAAATGGAAGCAAAAGAAAATGCTCTCAGTGCACTCTTCAGGTTCACAGACCCTACAAATATTGAGTCACAGCGAGATTTGGTGAAGCGCGGAATATATCCTTTGCTTGTAAGTTTTCTTAACACTGGTTCAGTCACAGCAAAGGCAAGAGCAGCAGCTTTCATTGGTGATCTTTCCATGAGTACTCCAAAGCTAACAGTTGTTCCGAAACCAACTGGTTGCTGGCTTTTCAGATCATCACGTGTTCCTTTATGTCCCGCACATGGGAGTGTATGCAGTGTGAATACCACATTTTGTCTGCTGGAAGCAAAGGCTTTACCTGGTTTGATAAAGCTGTTACACGGGGAGGTTCATGCAACTGCTTATGAAGCAATACAGACACTTTCCACATTGGTTGTAGAAGATTTTCCTCTAAGGGGAGCTCGTGTCCTGCATGAGTCAAATGTAATAAGATCCACATTGGACATTTTGAACTGGGGAGGTGAATCTCTAAAGGCAGAAGCTCTAGGGCTGTTGGAGAAGGTGTTTGTGTCAAAGGAAATGGTAGAATACTATGGAACAACAGCTAGATCACGTCTAATTGGTTTGACTGGCAAGAATATATATGGAGATGGTCACCTCAGGAGAAAGGCTGCCAAGGTTCTATCATTGCTAGAACGCTATTCAAAGTCATCATCATCTGCAATCTCTGGAGTTCTGGAGTGAAATTTTAGTCCATTCAGTAGTAACCATTGTATCCTAATAAACTTTTTTTAATCTATTGGGTATTTGTAAATTAACCTACTTAGATGCATCATGCATGTCACCTTGTTTTTCTTGAATATTGGCGTTGACAAATGGCCAATTCTTCAATATAAAGTTCCTTTGAAATTCAAATAAATTCTATGTATTCTCCTCTCCTGTCTCTTATATTTTCAC | 3255 | 0.4028 | MSGLELVPIGTILTVVTNQVLKTAQAASDVLVGKESFKALSKHLLDIEPVLKELQLQELNDSQAARIALKSLEDDVKKANNLVDKYRNRGRFYLLIKCRSIVEEVEQVTRDIGKSLAALSIANAEVLSRISDQINRLQSEMQREKFEASQSQIQIVDKLNQGLREQKLDQAFANDILEDIARAVGVPVEPSEISKELASIRKEKEEASIRKERAECVLLEQIIQLLSRADAARDYEEVERQYFERVKVIERYDSREKYIPPLNPFLCSITGAVMEDPVSLCTGTTCERSAIEAWFYDGNRTDPETKEILEDTTLRSNIPLRQSIEEWRELNYCLVIRSIRENLLSYSDLQESLSQMQALVRENSINKDWISIGKVTDNVISILGSFDDRDVKMKVLITLKDAVEGNTRNKEKVAESQGWDHIISCLGSDSSISKAAIDLLYELLQEQSGWNQYLCKKLSENHTAVRSLVALLKNHVNHSAEVAEKILMKLFELSEKTIIIAANFGWYKPLVDRMIQGQDSGISMTKAIVNLELNDSNLKLLGKEGAIPPLLEMLLGSIESKDLSLSALVKLAGSHANKGIIAASGGVPLILDLMFSPRSQAFIIIKCSEIIEKLSSGGDGIDFFVDGEGKQLELDSIITNLLTLQQNAISGHKIRKPALCALIGICKFETGLVKKAILAANGVSLILPLLDDSDSEIRETSIILLFLFSQHEPEGVVEYLFKPRRLEALIGFLENEENDNVQMAAAGLVANLPKSERELTMKLIGLGGLDAIISILKTGKMEAKENALSALFRFTDPTNIESQRDLVKRGIYPLLVSFLNTGSVTAKARAAAFIGDLSMSTPKLTVVPKPTGCWLFRSSRVPLCPAHGSVCSVNTTFCLLEAKALPGLIKLLHGEVHATAYEAIQTLSTLVVEDFPLRGARVLHESNVIRSTLDILNWGGESLKAEALGLLEKVFVSKEMVEYYGTTARSRLIGLTGKNIYGDGHLRRKAAKVLSLLERYSKSSSSAISGVLE | 1013 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g00407 | 1013 | SUPERFAMILY | ARM repeat | 371 | 713 | IPR016024 | - | |
| Pste4g00407 | 1013 | Pfam | U-box domain | 265 | 329 | IPR003613 | GO:0004842|GO:0016567 | |
| Pste4g00407 | 1013 | Gene3D | - | 502 | 629 | IPR011989 | - | |
| Pste4g00407 | 1013 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 263 | 334 | IPR013083 | - | |
| Pste4g00407 | 1013 | Gene3D | - | 6 | 123 | IPR036537 | GO:0007166 | |
| Pste4g00407 | 1013 | SMART | Ubox_2 | 264 | 327 | IPR003613 | GO:0004842|GO:0016567 | |
| Pste4g00407 | 1013 | Coils | Coil | 127 | 154 | - | - | |
| Pste4g00407 | 1013 | Coils | Coil | 62 | 89 | - | - | |
| Pste4g00407 | 1013 | Gene3D | - | 349 | 501 | IPR011989 | - | |
| Pste4g00407 | 1013 | SUPERFAMILY | RING/U-box | 249 | 330 | - | - |
Showing 1 to 10 of 26 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste4g00407 | 4 | 3117118 | 3122051 | Pste4g00407 | 4 | 3117118 | 3122051 | ECH |
Showing 1 to 1 of 1 entries