Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00399 ATGGAACCGCCATTGCAACAACAACCACCGCCACCATCACCTCGCGCCGCCACCATCCTCGGAAAGTACCAGCTCATACGCCTTCTCGGCCGCGGCAGCTTCGCCAAGGTTTACCAAGCTCGATCCCTCGTCGACGGCGCCACCGTCGCCGTCAAAATAATCGACAAATCGAAAACCGTCAACGCCGGCATGGAGCCGCGCATAATCCGCGAAATCGATGCCATGCGGCGCCTCCACCACCACCCTAACATCCTCAAAATCCACGAGGTGATGGCCACGAAGACAAAGATCCACCTCATCGTGGAGTACGCCGCCGGCGGAGAGCTCTTCGCGCGAATCTCCCGGCGCGGCCGGCTGTCGGAGTCCACGGCTCGCCGCTACTTCCAGCAGCTGGTCTCGGCGCTCCGGTTCTGCCACCGCAACGGCGTGGCACACCGCGACCTGAAGCCGCAGAATCTCCTCCTCGACGGTGACGGCAACCTCAAGGTCTCCGACTTCGGGCTCTCGGCGCTGCCGGAGCAGCTGAAGAACGGCCTCCTCCACACCGCGTGCGGCACGCCGGCGTACACGGCGCCGGAGATTCTCCGCCGGAGCGGCGGCTATGACGGGTCGAAGGCCGATGCCTGGTCCTGCGGCCTCATCCTTTTTGTCTTCGTCGCCGGATACTTCCCCTTTGACGACACCAACATTCCAGCCATGTGCAAGAAAATATCCCGCAGAGATTACCAATTCCCAGAATGGATTTCAAAACCGGTCCGTTTTGTTATCCATAAATTACTTGACCCGAACCCGGAAACCCGAATGAGCCTGGAGAGCCTGTTTGGGAACGCGTGGTTTAAGAAGTCATTAAACCCCGAAACTGCGGAGGGAAACACGTTCGGGTGGGATAGTGCTTTTCACGGGAAGTGCGGCTGTTACGAAGGGATGAGTGGCTCTTCAGGTGTGAGCGCGTTTGATATAATCTCGATGTCTTCGGGTTTGGATTTAACGAGGTTGTTCGAAACGACGTTAGACGGGGGGTGTAGGAGGGAGAAGAGGTTCAGTTCGAGTGCGCGCGTGGAGGCAGTGGAAGAGAAGGTTAAGGAAGTGGGTGGGGTTTTAGGGTTTAAGGTTGAGGTTGGGAAGAGTAACGGTGCAATTGCGTTGGTGAAAGGGAAAGTGACTTTGGTGTTTGAGTTGTTTCAGATTGTGCCTGATGAACTTCTTTTAGTGGCTCTCAAGGTGGTGGAGGGTGCGTTGGAGTTTGAGGAGCATCATTGGGGGTATTGGAAAGATGGCTTGGAAGATGTTGTGCTTTCTTGGCACAACCAAGAATCCTGA 1320 0.5659 MEPPLQQQPPPPSPRAATILGKYQLIRLLGRGSFAKVYQARSLVDGATVAVKIIDKSKTVNAGMEPRIIREIDAMRRLHHHPNILKIHEVMATKTKIHLIVEYAAGGELFARISRRGRLSESTARRYFQQLVSALRFCHRNGVAHRDLKPQNLLLDGDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILRRSGGYDGSKADAWSCGLILFVFVAGYFPFDDTNIPAMCKKISRRDYQFPEWISKPVRFVIHKLLDPNPETRMSLESLFGNAWFKKSLNPETAEGNTFGWDSAFHGKCGCYEGMSGSSGVSAFDIISMSSGLDLTRLFETTLDGGCRREKRFSSSARVEAVEEKVKEVGGVLGFKVEVGKSNGAIALVKGKVTLVFELFQIVPDELLLVALKVVEGALEFEEHHWGYWKDGLEDVVLSWHNQES 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00399 439 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00399 439 CDD CIPK_C 317 427 - -
Pste4g00399 439 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00399 439 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 18 404 - -
Pste4g00399 439 FunFam Non-specific serine/threonine protein kinase 13 300 - -
Pste4g00399 439 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00399 439 Pfam NAF domain 316 372 IPR004041 GO:0007165
Pste4g00399 439 ProSiteProfiles NAF domain profile. 310 334 IPR018451 GO:0007165
Pste4g00399 439 FunFam Non-specific serine/threonine protein kinase 16 108 - -
Pste4g00399 439 SUPERFAMILY Protein kinase-like (PK-like) 19 285 IPR011009 -
Pste4g00399 439 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pste4g00399 439 Gene3D Transferase(Phosphotransferase) domain 1 15 298 - -
Pste4g00399 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Pste4g00399 439 Gene3D Kinase associated domain 1, KA1 311 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00399 Pste-Chr4 3075687 3077006 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00399 7 436 CBL-interacting serine-threonine protein kinases AT4G14580 57.110 4.11e-168 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pste4g00399 Pkinase 9.4e-67 CL0016