Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00389 TTTATATTGTGAAAACCCTGCATTAATTTCTCCCCTACCACCTGGCCGGATCCTGATGCAATCTATCAGGAAGTCCTTCCAATCTTATGGTTCTTACAACAAGCCTTCCAAAAGGTTTTCCGGCGCCGGAAACTCCGATTCCGACCACGAGCACCTTCCCATTCTCCTGGACCAAGAGCCCCTCCGCCACAACCACAACCACAACCACAACCACAACCACAGTCGCAACGCCATGGCAGCCGGCGACCACGTCGTCAAGATCGACGACAACGCCGCCGCAGACCACCCAGCTCCCTCGCCCGCGCCCGCGCCCCAGGGCAACAGGATTTGGCGCGGCTCCAGCTACGAGTTCTGGAACGAGGAGAACTCCCCCTCGAACGCGAATGCGAACTCGAACGCGAACGCGAACGCGAACGAGGAGAGCAGCTTCGATTTCCGGCTGTCGGAGGACCCGCCGTCGCAGCTGATCGGGCGGTTCCTCCACAAGCAGCGGGCCTCCGGGGAAATGCAGCTGGACATGGATTTGGAAATGGAGGAGCTGCGGCGGGAAGGGGAGGAGGGAAAGTTGACGCCGGTGGCGGAATCTCCTGTGGCGAACCGCGTGTCGAGGGAGATGAAGGTGTCGTTCGAGGAAGGCGCTTACAGCATGAATCTGTTGGAAGGCCAAAACGACGCCGTGAGGAGAAGGCACAGCAAGGATTCTCTCTCGATCGGCGAGTTCCAACGTCCTCCTCAGCACCCCCAATACGAGCGTGAGCGTCGGCGCTCCCCGTCCCCCGACGGCGAGGTTGTTCGCTGCACCTCGAACGCTTCCTTCGACCGAAACCTCTCCATGCAGAGAAAATCCGCCTTGTTGAAGGCCAAAACCCGGTCTAGGTTACTGGACCCCCCCGAGGAGCCCGACCGCAAGTCCGGTCGTGTTTTTAAATCCGGGCAGATTCTTTCTGGCCTTTTGGGTCGTAAGGGTGACGAGGATGAGGACGATCCCTTTTTCGAAGAGGATCTTCCCGATGAGTTTAAGAAGACCCATTTCAGTTTCTGGATTCTTCTTGAGTGGTTGAGTCTCATTTTGATTATCGGTTTGTTGATAACCACCCTCTGCATTCCCTTTCTCCGTGACAAGGATCTTTGGCAGCTTAGGCTTTGGAAATGGGAGGTTATGGTTCTTGTTTTGATCTGTGGCCGTTTGGTCTCTGATTGGGTTGTTAGGATTGCCGTGTTCTTCATCGAGAGGAACTTCCTTTTGCGTAAGAGGGTCTTGTATTTTGTTTATGGCGTCCGCAAGGCTGTTCAGAATTGTGTCTGGTTGGGTCTTGTGTTGATTGCGTGGCATTTGCTCTTTGACAAGAGGGTCCAGAGGGAGACCCGCAGTGATTTCCTCGAGTATGTTACTAAGGTGTTGGTCTGCTTCCTCGTTGGGACTTTGGTGTGGTTGTTGAAGACCCTTGTGGTCAAGGTCTTGGCCTCTTCTTTCCATGTCAGCACCTACTTTGATAGGATTCAGGAATCCCTCTTCAATCAGTTTGTCATCGAGACCCTCTCTGGTCCCCCTTTGGTCGAGATTCAGAAGGCCGAAGAGGAGGAGGAGAGGCTCGCCGATGAGGTTCAGAAGCTCCAGAATGCCGGTGTTACCATCCCCCCTGACCTTCGCGCCACTGCCTTTTCTAATATTAAGAGTGGTCGCCTCAGGAGTGGACTTCTCTCCAAGAGCCCCCGAGTTAAGAGTGCCAAGTTTTCCCGCCCTCTTTCCAAGAACTCCGATGACGGCAATGTCATCACTATTGATAACCTCCACAAGCTCAATCCCAATAACGTCTCTGCCTGGAACATGAAAAGGCTCATGAACATGGTCCGCCATGGGGCTCTTACTACCCTCGACGAACAGATTCTTGATGACATTAATGAAGACGAGAATGCTACCCAAATTAGAAGCGAAAACGAGGCCAAAGCTGCAGCCAAGAAAATTTTTCATAATGTTGCTAGGCGTGGCTGCAGGTATATATACCCCGATGACTTGTTGCGCTTTATGCGAGAAGACGAAGCTGCCAAAACCATGAATCTCTTCGAAGGAGCCTCTGATGCTGGCAGAATCGGCAAATCAGTCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCAGTGAACAAACTTCATAGAATGCTCAATTTTATAGTTGCAATTGTTATACTGGTTATTTGGCTCTTGATACTGGAACTTGCTACCACCAAATTTCTTCTCTTCGTGAGCTCACAGATTGTCGTGGTTGCCTTTATATTTGGAAACACCTGCAAGACCATATTTGAGGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGATTCAGATGGTGGTGGAAGAAATGAACATATTGACAACTGTATTTCTGAAATACGATAATCAAAAAGTCTTCATCCCTAACAGCGTCCTTGCGACCAAAGCTATATATAACTATTACCGGAGTCCTGACATGGGAGATATTATCGAATTCTACATTCATATATATACCCCAGTTGAAAAGATTTCAGTTATGAAACACAAAATACAAAATTACATCGATAACAAGAAGGAGCACTGGTATCCTTCACCTGTGATAGTCTTCAGGGATTATGCCCAATTAGACATGGTGAAAATGGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACAATGGAGAAAGGTTAGTGAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTCAGAGAGCTTGACATTTATTACCGTCTCCTACCCCTGGACATTAACGTGAGAGCCACACCTAACACTTCTGAGCGGCTTCCACCTAGTTGGACATCAGCTTCAGCTCCAAGTTGAGTAGAAGGAAAATTCATGTAATTGAGCCTCATCTTTTGTGGAAACCCGCTGCCTGCTTCCAAGTGCTATATTTTTATTTTAGCAAGATAGCATATTGTAAAGAGAGAGGGTTTTTTCCTTTTTAGATTAGTTTTGATATGTACTTTGGTTAGTCTGTAGTTATGAAGCCATGCCTAGGCACATGCCTTTTTCTCGTAGGTTTTTTGTTGAAATGATTAGTATTATTCGTCACTACCTCTCCTTTATACTACCATATTCAGTTTAAATTCTACATTTCTATCTTTTGGCCCAACATAAGGCAG 3210 0.4829 MQSIRKSFQSYGSYNKPSKRFSGAGNSDSDHEHLPILLDQEPLRHNHNHNHNHNHSRNAMAAGDHVVKIDDNAAADHPAPSPAPAPQGNRIWRGSSYEFWNEENSPSNANANSNANANANEESSFDFRLSEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELRREGEEGKLTPVAESPVANRVSREMKVSFEEGAYSMNLLEGQNDAVRRRHSKDSLSIGEFQRPPQHPQYERERRRSPSPDGEVVRCTSNASFDRNLSMQRKSALLKAKTRSRLLDPPEEPDRKSGRVFKSGQILSGLLGRKGDEDEDDPFFEEDLPDEFKKTHFSFWILLEWLSLILIIGLLITTLCIPFLRDKDLWQLRLWKWEVMVLVLICGRLVSDWVVRIAVFFIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDKRVQRETRSDFLEYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRATAFSNIKSGRLRSGLLSKSPRVKSAKFSRPLSKNSDDGNVITIDNLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDDINEDENATQIRSENEAKAAAKKIFHNVARRGCRYIYPDDLLRFMREDEAAKTMNLFEGASDAGRIGKSVLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVILVIWLLILELATTKFLLFVSSQIVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGIQMVVEEMNILTTVFLKYDNQKVFIPNSVLATKAIYNYYRSPDMGDIIEFYIHIYTPVEKISVMKHKIQNYIDNKKEHWYPSPVIVFRDYAQLDMVKMAIWPTHRMNFQDNGERLVRRSLLLEEMIKIFRELDIYYRLLPLDINVRATPNTSERLPPSWTSASAPS 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00389 950 Gene3D - 773 822 IPR023408 -
Pste4g00389 950 Coils Coil 500 523 - -
Pste4g00389 950 MobiDBLite consensus disorder prediction 102 124 - -
Pste4g00389 950 MobiDBLite consensus disorder prediction 1 32 - -
Pste4g00389 950 MobiDBLite consensus disorder prediction 227 242 - -
Pste4g00389 950 Pfam Mechanosensitive ion channel 715 873 IPR006685 GO:0016020|GO:0055085
Pste4g00389 950 MobiDBLite consensus disorder prediction 1 24 - -
Pste4g00389 950 PIRSF Memb_At2g17000 48 950 IPR016688 -
Pste4g00389 950 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 51 943 IPR016688 -
Pste4g00389 950 FunFam Predicted mechanosensitive ion channel 773 822 - -
Pste4g00389 950 MobiDBLite consensus disorder prediction 209 251 - -
Pste4g00389 950 SUPERFAMILY Sm-like ribonucleoproteins 763 822 IPR010920 -
Pste4g00389 950 MobiDBLite consensus disorder prediction 102 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00389 Pste-Chr4 2993570 2997586 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00389 59 950 Mechanosensitive Ion Channel Family AT1G78610 56.352 0.0 931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00389 4 2993570 2997586 Pste4g00389 4 2993570 2997586 ECH