Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste4g00389 | TTTATATTGTGAAAACCCTGCATTAATTTCTCCCCTACCACCTGGCCGGATCCTGATGCAATCTATCAGGAAGTCCTTCCAATCTTATGGTTCTTACAACAAGCCTTCCAAAAGGTTTTCCGGCGCCGGAAACTCCGATTCCGACCACGAGCACCTTCCCATTCTCCTGGACCAAGAGCCCCTCCGCCACAACCACAACCACAACCACAACCACAACCACAGTCGCAACGCCATGGCAGCCGGCGACCACGTCGTCAAGATCGACGACAACGCCGCCGCAGACCACCCAGCTCCCTCGCCCGCGCCCGCGCCCCAGGGCAACAGGATTTGGCGCGGCTCCAGCTACGAGTTCTGGAACGAGGAGAACTCCCCCTCGAACGCGAATGCGAACTCGAACGCGAACGCGAACGCGAACGAGGAGAGCAGCTTCGATTTCCGGCTGTCGGAGGACCCGCCGTCGCAGCTGATCGGGCGGTTCCTCCACAAGCAGCGGGCCTCCGGGGAAATGCAGCTGGACATGGATTTGGAAATGGAGGAGCTGCGGCGGGAAGGGGAGGAGGGAAAGTTGACGCCGGTGGCGGAATCTCCTGTGGCGAACCGCGTGTCGAGGGAGATGAAGGTGTCGTTCGAGGAAGGCGCTTACAGCATGAATCTGTTGGAAGGCCAAAACGACGCCGTGAGGAGAAGGCACAGCAAGGATTCTCTCTCGATCGGCGAGTTCCAACGTCCTCCTCAGCACCCCCAATACGAGCGTGAGCGTCGGCGCTCCCCGTCCCCCGACGGCGAGGTTGTTCGCTGCACCTCGAACGCTTCCTTCGACCGAAACCTCTCCATGCAGAGAAAATCCGCCTTGTTGAAGGCCAAAACCCGGTCTAGGTTACTGGACCCCCCCGAGGAGCCCGACCGCAAGTCCGGTCGTGTTTTTAAATCCGGGCAGATTCTTTCTGGCCTTTTGGGTCGTAAGGGTGACGAGGATGAGGACGATCCCTTTTTCGAAGAGGATCTTCCCGATGAGTTTAAGAAGACCCATTTCAGTTTCTGGATTCTTCTTGAGTGGTTGAGTCTCATTTTGATTATCGGTTTGTTGATAACCACCCTCTGCATTCCCTTTCTCCGTGACAAGGATCTTTGGCAGCTTAGGCTTTGGAAATGGGAGGTTATGGTTCTTGTTTTGATCTGTGGCCGTTTGGTCTCTGATTGGGTTGTTAGGATTGCCGTGTTCTTCATCGAGAGGAACTTCCTTTTGCGTAAGAGGGTCTTGTATTTTGTTTATGGCGTCCGCAAGGCTGTTCAGAATTGTGTCTGGTTGGGTCTTGTGTTGATTGCGTGGCATTTGCTCTTTGACAAGAGGGTCCAGAGGGAGACCCGCAGTGATTTCCTCGAGTATGTTACTAAGGTGTTGGTCTGCTTCCTCGTTGGGACTTTGGTGTGGTTGTTGAAGACCCTTGTGGTCAAGGTCTTGGCCTCTTCTTTCCATGTCAGCACCTACTTTGATAGGATTCAGGAATCCCTCTTCAATCAGTTTGTCATCGAGACCCTCTCTGGTCCCCCTTTGGTCGAGATTCAGAAGGCCGAAGAGGAGGAGGAGAGGCTCGCCGATGAGGTTCAGAAGCTCCAGAATGCCGGTGTTACCATCCCCCCTGACCTTCGCGCCACTGCCTTTTCTAATATTAAGAGTGGTCGCCTCAGGAGTGGACTTCTCTCCAAGAGCCCCCGAGTTAAGAGTGCCAAGTTTTCCCGCCCTCTTTCCAAGAACTCCGATGACGGCAATGTCATCACTATTGATAACCTCCACAAGCTCAATCCCAATAACGTCTCTGCCTGGAACATGAAAAGGCTCATGAACATGGTCCGCCATGGGGCTCTTACTACCCTCGACGAACAGATTCTTGATGACATTAATGAAGACGAGAATGCTACCCAAATTAGAAGCGAAAACGAGGCCAAAGCTGCAGCCAAGAAAATTTTTCATAATGTTGCTAGGCGTGGCTGCAGGTATATATACCCCGATGACTTGTTGCGCTTTATGCGAGAAGACGAAGCTGCCAAAACCATGAATCTCTTCGAAGGAGCCTCTGATGCTGGCAGAATCGGCAAATCAGTCTTGAAGAACTGGGTGGTCAATGCCTTCAGGGAGAGGAGAGCACTTGCTTTGACATTGAATGACACCAAAACGGCAGTGAACAAACTTCATAGAATGCTCAATTTTATAGTTGCAATTGTTATACTGGTTATTTGGCTCTTGATACTGGAACTTGCTACCACCAAATTTCTTCTCTTCGTGAGCTCACAGATTGTCGTGGTTGCCTTTATATTTGGAAACACCTGCAAGACCATATTTGAGGCAATTATTTTCTTATTTGTCATGCACCCATTTGATGTGGGAGATAGATGTGAAATTGATGGGATTCAGATGGTGGTGGAAGAAATGAACATATTGACAACTGTATTTCTGAAATACGATAATCAAAAAGTCTTCATCCCTAACAGCGTCCTTGCGACCAAAGCTATATATAACTATTACCGGAGTCCTGACATGGGAGATATTATCGAATTCTACATTCATATATATACCCCAGTTGAAAAGATTTCAGTTATGAAACACAAAATACAAAATTACATCGATAACAAGAAGGAGCACTGGTATCCTTCACCTGTGATAGTCTTCAGGGATTATGCCCAATTAGACATGGTGAAAATGGCTATCTGGCCAACTCATAGAATGAACTTCCAAGACAATGGAGAAAGGTTAGTGAGGAGATCCCTTTTGCTTGAAGAGATGATCAAGATTTTCAGAGAGCTTGACATTTATTACCGTCTCCTACCCCTGGACATTAACGTGAGAGCCACACCTAACACTTCTGAGCGGCTTCCACCTAGTTGGACATCAGCTTCAGCTCCAAGTTGAGTAGAAGGAAAATTCATGTAATTGAGCCTCATCTTTTGTGGAAACCCGCTGCCTGCTTCCAAGTGCTATATTTTTATTTTAGCAAGATAGCATATTGTAAAGAGAGAGGGTTTTTTCCTTTTTAGATTAGTTTTGATATGTACTTTGGTTAGTCTGTAGTTATGAAGCCATGCCTAGGCACATGCCTTTTTCTCGTAGGTTTTTTGTTGAAATGATTAGTATTATTCGTCACTACCTCTCCTTTATACTACCATATTCAGTTTAAATTCTACATTTCTATCTTTTGGCCCAACATAAGGCAG | 3210 | 0.4829 | MQSIRKSFQSYGSYNKPSKRFSGAGNSDSDHEHLPILLDQEPLRHNHNHNHNHNHSRNAMAAGDHVVKIDDNAAADHPAPSPAPAPQGNRIWRGSSYEFWNEENSPSNANANSNANANANEESSFDFRLSEDPPSQLIGRFLHKQRASGEMQLDMDLEMEELRREGEEGKLTPVAESPVANRVSREMKVSFEEGAYSMNLLEGQNDAVRRRHSKDSLSIGEFQRPPQHPQYERERRRSPSPDGEVVRCTSNASFDRNLSMQRKSALLKAKTRSRLLDPPEEPDRKSGRVFKSGQILSGLLGRKGDEDEDDPFFEEDLPDEFKKTHFSFWILLEWLSLILIIGLLITTLCIPFLRDKDLWQLRLWKWEVMVLVLICGRLVSDWVVRIAVFFIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHLLFDKRVQRETRSDFLEYVTKVLVCFLVGTLVWLLKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIQKAEEEEERLADEVQKLQNAGVTIPPDLRATAFSNIKSGRLRSGLLSKSPRVKSAKFSRPLSKNSDDGNVITIDNLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDDINEDENATQIRSENEAKAAAKKIFHNVARRGCRYIYPDDLLRFMREDEAAKTMNLFEGASDAGRIGKSVLKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFIVAIVILVIWLLILELATTKFLLFVSSQIVVVAFIFGNTCKTIFEAIIFLFVMHPFDVGDRCEIDGIQMVVEEMNILTTVFLKYDNQKVFIPNSVLATKAIYNYYRSPDMGDIIEFYIHIYTPVEKISVMKHKIQNYIDNKKEHWYPSPVIVFRDYAQLDMVKMAIWPTHRMNFQDNGERLVRRSLLLEEMIKIFRELDIYYRLLPLDINVRATPNTSERLPPSWTSASAPS | 950 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste4g00389 | 950 | Gene3D | - | 773 | 822 | IPR023408 | - | |
| Pste4g00389 | 950 | Coils | Coil | 500 | 523 | - | - | |
| Pste4g00389 | 950 | MobiDBLite | consensus disorder prediction | 102 | 124 | - | - | |
| Pste4g00389 | 950 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
| Pste4g00389 | 950 | MobiDBLite | consensus disorder prediction | 227 | 242 | - | - | |
| Pste4g00389 | 950 | Pfam | Mechanosensitive ion channel | 715 | 873 | IPR006685 | GO:0016020|GO:0055085 | |
| Pste4g00389 | 950 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Pste4g00389 | 950 | PIRSF | Memb_At2g17000 | 48 | 950 | IPR016688 | - | |
| Pste4g00389 | 950 | PANTHER | MECHANOSENSITIVE ION CHANNEL PROTEIN 5 | 51 | 943 | IPR016688 | - | |
| Pste4g00389 | 950 | FunFam | Predicted mechanosensitive ion channel | 773 | 822 | - | - |
Showing 1 to 10 of 13 entries
Duplication type information
Functional genes information
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste4g00389 | 4 | 2993570 | 2997586 | Pste4g00389 | 4 | 2993570 | 2997586 | ECH |
Showing 1 to 1 of 1 entries