Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00383 GGAAGTTGTCAAGACATGACCAACCAAACTAGGGTTCACAACTTAAGTTTGCCCAACTAAGTTTCTCACTATCATTTTATTCTTTTACAAACTAAAAACTTGATTCTCTCTGTTCCATGGTGCGTGGGAGGAAGAGGCTGAAAGGGAGCACTGCCATTATTCCTGTGGATGCAAACCCCACTCAGCCAAAAATACAATCTTTAGATTTTTATGCCGAGGGTGAGACCAAAAGGATTACATTTGCTGAAAACCATGGTGACGACGGGGTAGTGGCTTCTTCTTCGGTTAAAGAAGGCGTGAAAAAGAAACGTGGCAGAAAAAGTAAAAAGGAGAGGGAAAATATGAACAATATGGTGTTAGAGGGCAAGAAAGATGCTCAAGACGATGGCCACCGCGAAAATGGTGGGGTAGGAGGTTCTTCTTCTGTTCAAGAAGTTGTGTGGAAGAAGCGTGGCAGAAAGAGTAAAAAGGAGAAGGAGGACATGGAGAGGAAGCTGTTACAGGGCGATTTGTTGCAGAAGAAAGATACTCAAGACATTAATCATGGTGCTAACGGTGGCTTAGGAGGTTCTTCTTCTGTTCAAGAAGTTGTAAGAAAGAAGCGTGGCAGAAAGAGTAAGAAGGAGAAGGAGGACATGGAAAGGAAGATGTTAGAGGGCAATTTATTGGAGAAAAAATATGTTCAAGATGTGAACCACGGTGAAAATGGCGGGATAGGAGGTTCTTCTTCTCAAGGTACGAAAAAGAAGCGTGGCAGAAAGAGTAAAAAGGAGAAAGAGGGTATGGGAAACGTGTTAGAGGGCAATATGTTGGAGAATAATGATGTTCAAGATGTTAACCACGGTGAAAATGCCGGGGCAGGAGTTTCTTCTCCCGTTCAAGGTGTAAGAAAGAAGCCTGGCAGAAAGAGTAAAAAGGAGAAGGAAGATATGGAAAAGATGTTAAAGGGCGATTTGTTGGAGAAAAAAGATGTTCAAGATGTGAACCACCTTGAAAATTCTGAGGTTGGAAGTTCTTCTGTTCAAGGTGTGAAAAAGAAACGTGGCAGAAAGAGTAAAAAGGAGGGAGAGGATATAAAACACATGTCAGAGGGCAATTTATTGGAGAAGAAAGATGTTCAAGATTTTAACCACGGTGAAAATAGCAAGGTTCCTGAGAAGAGACGTGGAAGAAAAAGAAAGATTCTTAAGGAAGATGATGGTGACTTTGCAGTGCCTGCGGATTCTTCAGGAAGTGGCATTCAAAAAAGATATAGTCTTAGGGCCCCTAAAGTCAGTATAGAAGTGGTGGAGCTAAAAACCAACAAGAAGGATAGTAAGTGGATTGAAGAGCAGTCCCTAATGTGTCATCAGTGTCAGAGGAATGATAAAGGCAGGGTTGTGAGGTGTTTAAGTTGTAAGAAGAAAAGATTTTGCTTACACTGTATAGCAGCTTGGTATCCTCATTTAGAAGAAGATTATATTGCTGAGGCATGTCCTGTGTGCCGTGGTAATTGCAACTGCAAAGCATGCTTGAGATCCAATGAACTTATTGAGAAAATGAAGAAACAAACAGAAACCAAGCAAGATGAGAAGGTTGAACACACTATGCATTTGCTGCAAGTACTTCTTCCGTATTTAAAGCTGTTGGATGAAGAACAGATGGTTGAGACTGTGACAGAAGCTAAGATACAGGGGCTATCAGTTTCAAAGCTGAATATAGTAGAGAGAAATTTCCCTAAAGATGAGCGTGTGTACTGTGACAACTGCAAAACATCAATATTTGATTACCATAGAAGCTGCACAGAATGCTCTTTTGACCTTTGTCTCATCTGTTGCCGTGAGCTTCGTAGTGGGCAGCTTGTAGGTGGTGCAGATCCAATTAAGTTGGAGTTTGTCTGTGAAGATCGTGGTTACTTGCATGGTAAAACAGAAGATAAAAGGGTAAAACAAAATGCACCAAATTCAGTTGATAAGCCTGTTGATCGTGATTGGTCAAGATCTGGGTGGCATGCAGAAAGTAATGGTAACATTCCTTGTCCAAAAGTTAATGATGAATGTAACCATGGCTTTCTTGAACTGAGAAGCATATTAGGTCAACATTTTATCACTGATTTAGTGAAAAAAGCAAATGAACTAGAGCAAGTATACAAGCTTCAAGATATAGTTAAGACTCCTGACAACTTCTGCCCGTGTATGAGGCTTGATATAAACACAGATTTTAGATATAATATGAGGAAGGCTGCTTCTCGTGCAGATTCTAGTGACAATTATTTATACTGTCCTAGGGCCGTAGATTTACAGTACAAGGATTTAAGGCATTTTCAGTGGCACTGGGAAAAGGGGGAGCCTGTAATTGTCAGCAATGTGCTTGAATGTACATCTGGTTTAAGCTGGGAACCACTTGTCATGTGGCGTGCATTTCGTCAGATGTCCAATACCAAGCATGAACAGCATTTGAATGTGAAAGCAATTGATTGCTTAGATTGGTGTGAGGGAGAAATTAATATCCACCAATTCTTTACTGGGTATACAAAAGCTCGTGAGGATTGGCTTGGTTGGCCTCAAATATTGAAATTAAAAGATTGGCCTTCTTCTAATTTATTTGAGGAACGTTTGCCTCGACATTGTGCTGAGTTCATATCTTCCTTGCCCTTCAAGGAATACACTGATCCTCTCAGAGGTTCTCTTAACCTAGCTGTGAAGTTGCCTGATGATTATCTAAAGCCAGACATGGGGCCAAAGACATATATTGCTTATGGGTTTCCTCAGGAGCTTGGGCGTGGTGATTCAGTGACCAAGCTGCATTGTGATATGTCAGATGCAGTAAATGTATTGACTCATATTGCTGAAATGAAATTGGAACAAAAGCATCTTAGTGCCATTGAGAAGTTGAAACAAAATCACTTTGAGCAAGATAAAATGGAGCTACTTGGTGATGATCAGGATGGAGAAACTAGTGTTGACATGCTTAATGATTCATCTTCTAGCATAAATGCTTTGGCCAAGCAAAACCATGTCCAAGTCATGGAACACAAAGGTGGATTATGTGCTGAGAATAAAGTTGATCAGTTTCATCAATCCTCTGGTGGTAATGAGGTTGCCATTGCTAATGAGAATGGACTTTCATGTGGATTGGAGCTCAAAGAGGTTGACAATGTAAAAGTAAAGTGCGGAAGTGATTTGTTGTTGGTGGAGGAAGGTTCTGAAGGTGCTCTCTGGGATATTTTTCGCAGGCAGGATGTACCTAAATTGCAGGAATATCTGAGGAAGCATTTCAGAGAGTTTAGGCATATCCATTGCTGCCCTTTGAAGAAGGTTATTCACCCCATCCATGACCAGACCTTCTATCTGACCGGGGAGCATAAGAGAAAGCTTAAGGAGGAGTATGGAATTGAGCCTTGGACTTTTATTCAGAAGGTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTCCCCATCAAGTCAGAAATCTAAAGTCATGTATTAAGGTTGCATTGGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTTCGTCTAACGGAGGAATTTCGAACACTTCCAATAAACCACACCTCCAGTGAGGACAAATTGGAGGTATGCCAAACTCAT 3590 0.4103 MVRGRKRLKGSTAIIPVDANPTQPKIQSLDFYAEGETKRITFAENHGDDGVVASSSVKEGVKKKRGRKSKKERENMNNMVLEGKKDAQDDGHRENGGVGGSSSVQEVVWKKRGRKSKKEKEDMERKLLQGDLLQKKDTQDINHGANGGLGGSSSVQEVVRKKRGRKSKKEKEDMERKMLEGNLLEKKYVQDVNHGENGGIGGSSSQGTKKKRGRKSKKEKEGMGNVLEGNMLENNDVQDVNHGENAGAGVSSPVQGVRKKPGRKSKKEKEDMEKMLKGDLLEKKDVQDVNHLENSEVGSSSVQGVKKKRGRKSKKEGEDIKHMSEGNLLEKKDVQDFNHGENSKVPEKRRGRKRKILKEDDGDFAVPADSSGSGIQKRYSLRAPKVSIEVVELKTNKKDSKWIEEQSLMCHQCQRNDKGRVVRCLSCKKKRFCLHCIAAWYPHLEEDYIAEACPVCRGNCNCKACLRSNELIEKMKKQTETKQDEKVEHTMHLLQVLLPYLKLLDEEQMVETVTEAKIQGLSVSKLNIVERNFPKDERVYCDNCKTSIFDYHRSCTECSFDLCLICCRELRSGQLVGGADPIKLEFVCEDRGYLHGKTEDKRVKQNAPNSVDKPVDRDWSRSGWHAESNGNIPCPKVNDECNHGFLELRSILGQHFITDLVKKANELEQVYKLQDIVKTPDNFCPCMRLDINTDFRYNMRKAASRADSSDNYLYCPRAVDLQYKDLRHFQWHWEKGEPVIVSNVLECTSGLSWEPLVMWRAFRQMSNTKHEQHLNVKAIDCLDWCEGEINIHQFFTGYTKAREDWLGWPQILKLKDWPSSNLFEERLPRHCAEFISSLPFKEYTDPLRGSLNLAVKLPDDYLKPDMGPKTYIAYGFPQELGRGDSVTKLHCDMSDAVNVLTHIAEMKLEQKHLSAIEKLKQNHFEQDKMELLGDDQDGETSVDMLNDSSSSINALAKQNHVQVMEHKGGLCAENKVDQFHQSSGGNEVAIANENGLSCGLELKEVDNVKVKCGSDLLLVEEGSEGALWDIFRRQDVPKLQEYLRKHFREFRHIHCCPLKKVIHPIHDQTFYLTGEHKRKLKEEYGIEPWTFIQKVGDAVFIPAGCPHQVRNLKSCIKVALDFVSPENVGECFRLTEEFRTLPINHTSSEDKLEVCQTH 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00383 1158 MobiDBLite consensus disorder prediction 43 373 - -
Pste4g00383 1158 SUPERFAMILY Clavaminate synthase-like 720 1153 - -
Pste4g00383 1158 ProSiteProfiles Zinc finger RING-type profile. 410 457 IPR001841 -
Pste4g00383 1158 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 68 1155 IPR045109 GO:0032454|GO:0033169
Pste4g00383 1158 Gene3D Cupin 716 1148 - -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 312 365 - -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 108 138 - -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 71 93 - -
Pste4g00383 1158 Pfam JmjC domain, hydroxylase 1024 1122 IPR003347 -
Pste4g00383 1158 ProSiteProfiles JmjC domain profile. 846 1139 IPR003347 -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 139 153 - -
Pste4g00383 1158 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 405 474 IPR018866 -
Pste4g00383 1158 SMART cupin_9 827 1139 IPR003347 -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 168 192 - -
Pste4g00383 1158 MobiDBLite consensus disorder prediction 264 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00383 Pste-Chr4 2913874 2921356 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pste4g00383 JmjC 2.3e-13 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00383 4 2913874 2921356 Pste4g00383 4 2913874 2921356 ECH