Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00357 AAGGAACTAGCTAGCTAGAGTGTGAGACTACTCGATCTACCACATACTAGTACTACTACATTCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTTCCTTCTATTGCCATAAACATTACAATACCACAAACATGGTGAGAGCTCCCTGTTGTGAAAAGATGGGTTTGAAGAAGGGTCCTTGGGATCCCGAGGAAGATCAAATCCTCACATCTTACATCCAAAACCATGGCCATGGAAATTGGCGTGCCCTCCCAAAACAAGCTGGCCTGTTAAGGTGTGGGAAGAGCTGTAGACTGCGTTGGATTAACTATTTGAGGCCTGATATCAAGAGAGGGAATTTCACCACTGAAGAAGAGGAAACTATCATTAAGCTGCATGAGATTTTGGGAAACAGGTGGTCAGCAATTGCAGCCAAGTTGCCAGGAAGAACTGACAATGAAATAAAAAATGTATGGCACACCAATTTGAAGAAGAGGCTGCTAAAAGCAGACCAGTTAACTAATCGAAATTCGAAAAGAGCCACTAAGCCAAAAATCAAACGTTCTGATTCCAATTCCAGCATCATAACTCAATCAGAACCTGCCAATTTTAATTTCAGAGAAATGGACACAACATCAGCATGCACTACCACTTCTAGTGATTTTTCATCTGTCACGGTTGGTGATAGCAAAAATATCAAGAGTGAAGACATTGAGTCTCTGGAGACAATGCCTGTAATAGATGAGAGCTTTTGGTCAGAAACTGCAATTGATGAAACCCCCACCATGTCATCACAATCTTTGACAATCTCAAACGATATGCCACTTCAATACCCTTTTACTAACTATGAGGAAACATTCCAACAGAGTCATTCTTATGATTCAAACTTTGATGACGGCATGGATTTCTGGTATGACATATTCACCAGGACTGCTGATTCAGCAGAATTGCCAGAGTTCTGAATTTTTCATGCGACACGTTGAATGTGGGCATTATTAAATTTCGCATAGAGAATAGTTTAAATGAAATGGTATCTTGAATTTGACCGTTACAACAAAAGGGCATGATAATTTCTGCTGTGGGGGCTGCATTATCGCCAGCTGCAAGATCTAAGAGTCATCCATTGACAAAGAAACCGGCCAGAGAGTAATGGAAAAGGCTAATGATATGTAATGTATGTAGACATGTACGTAATCTACTAGTGAAACACTGACTTTTTTTTTTTAGTGAAAAAAATAGCATTTCTCTAACATTTTTGTTTTTTAGAAATTAGAGTTTAAATAGGCTAGAG 1267 0.3938 MVRAPCCEKMGLKKGPWDPEEDQILTSYIQNHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFTTEEEETIIKLHEILGNRWSAIAAKLPGRTDNEIKNVWHTNLKKRLLKADQLTNRNSKRATKPKIKRSDSNSSIITQSEPANFNFREMDTTSACTTTSSDFSSVTVGDSKNIKSEDIESLETMPVIDESFWSETAIDETPTMSSQSLTISNDMPLQYPFTNYEETFQQSHSYDSNFDDGMDFWYDIFTRTADSAELPEF 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00357 269 MobiDBLite consensus disorder prediction 120 150 - -
Pste4g00357 269 CDD SANT 69 112 IPR001005 -
Pste4g00357 269 Gene3D - 13 66 - -
Pste4g00357 269 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste4g00357 269 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste4g00357 269 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste4g00357 269 CDD SANT 16 61 IPR001005 -
Pste4g00357 269 SMART sant 13 63 IPR001005 -
Pste4g00357 269 SMART sant 66 114 IPR001005 -
Pste4g00357 269 Gene3D - 68 148 - -
Pste4g00357 269 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Pste4g00357 269 FunFam Myb transcription factor 11 67 - -
Pste4g00357 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste4g00357 269 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pste4g00357 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste4g00357 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00357 Pste-Chr4 2761269 2763488 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00357 1 269 MYB Transcription Factor Family AT2G31180 50.890 7.04e-83 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste4g00357 Myb_DNA-binding 1e-13 CL0123