Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00349 ATGTCGAACTCCGAGGCCACCACAAACGGCTCAATAATGGAGGCCCAGCGCCAAAGCCAAGCTCAGGCTCAGGCTCAGGCACAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAACTCAAACTCAAACTCAAACTCAAGCTCCGCAGGCCTTAGCAGTGAAGAAGCCACCCTCCAAGGACCGTCACAGCAAGGTCGATGGCCGGGGACGCCGCATAAGGATGCCAATAATATGCGCAGCACGTGTCTTCCAGCTCACGCGCGAGCTCGGCCACAAGTCCGACGGTCAAACCATAGAGTGGCTCCTCCGCCAGGCAGAGCCCTCCATAATCGCCGCCACCGGAACTGGCACCACCCCCGCGAGCTTCTCCTCCGTCTCCCTCTCCGTCCGCGGCGCCCCCTCTCTCTCCTCCCCTTCCTCCACCTCCGACCACAAGCCCCAGCTCCTCTCTCCCACCCCTTTTATTCTCGGCAAGCGCATACGCACCGACGAAGACTCCTCTAAAGACGACGCTGTCTCCGTGGGCCCCTCTCTTGTGGGCCCCTCTACCCCTCCTGGTTTGTGGGCCCTCCCTCCCCGCCCCGATTTCGCTCAAATTTGGAGCTTCGCCGCGGCTCCCGATATGGTCGTCCAGCCCGCCGCCGTCTCCGTCTCTCATCAACATCAACATCAACATCAACAGCAGCAGCAGCAGCAGCAGCAGGCCTCCCTCTTCGCTCATCACCACCGTCAGCAGCACCAACAAGCCATCGGAGAAGCTTCGGCCGCCAGGGTCGGCAATTACCTTCCCGGTCATCTCAATTTGCTGGCTTCCTTGTCCGGTGGGCCTGGGAATTCTGGTCGGAGAGACGACGAGCCTCGCTGA 882 0.6066 MSNSEATTNGSIMEAQRQSQAQAQAQAQAQAQAQAQAQAQAQAQTQTQTQTQAPQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRGAPSLSSPSSTSDHKPQLLSPTPFILGKRIRTDEDSSKDDAVSVGPSLVGPSTPPGLWALPPRPDFAQIWSFAAAPDMVVQPAAVSVSHQHQHQHQQQQQQQQQASLFAHHHRQQHQQAIGEASAARVGNYLPGHLNLLASLSGGPGNSGRRDDEPR 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00349 293 MobiDBLite consensus disorder prediction 61 77 - -
Pste4g00349 293 MobiDBLite consensus disorder prediction 135 195 - -
Pste4g00349 293 ProSiteProfiles TCP domain profile. 64 118 IPR017887 -
Pste4g00349 293 MobiDBLite consensus disorder prediction 135 154 - -
Pste4g00349 293 MobiDBLite consensus disorder prediction 1 77 - -
Pste4g00349 293 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 254 IPR005333 GO:0003700
Pste4g00349 293 MobiDBLite consensus disorder prediction 221 258 - -
Pste4g00349 293 MobiDBLite consensus disorder prediction 1 57 - -
Pste4g00349 293 Pfam TCP family transcription factor 64 243 IPR017887 -
Pste4g00349 293 MobiDBLite consensus disorder prediction 221 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00349 Pste-Chr4 2703017 2703898 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00349 56 293 TCP Transcription Factor Family AT5G23280 64.876 2.89e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste4g00349 TCP 4e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00349 4 2703017 2703898 Pste4g00349 4 2703017 2703898 ECH