Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00343 CAAAAAAGCTGTTTCTTTCAAATTCTTGAGCTCCTCTTCTCCATACAACCAAACGGGGTCTTGTGAGGCTGAGGCTATTCCGCGAACGCGAACACACTGCATTGCGTTTCTGACTTCTGAGTTGGGAATCGCTAATGCGCTACGATTCTTTCAACGTGAACTCCGTTCTCCGAGATCTTCGTCTCAGTCATTCTTCTTCACAACTCATCTTCTGCGTTTTCTGAGCCCTCTCTGCACGTGAACCGAGGAGAACTTCTGTTGTTGTTGTTCAAATCTTAATTGTTATCTTCATTTTTAGTTTCTTACTGATGCATTTCAACTCAGTTTATGTTTATCCTTTATTTTTGGATTTTTTATTATAATTTACTTTTTCAGAAATTTCCATTTAAGTAGAGCATAAGATCTGTTTCTGCGTGAAGGTGGAAAACGTTTTCAACCTCGAAGGGAGTTCATTAAGTTTGGGTCCATTGGATTAGGCTCAGTGGGGGCGTGGTTGTGTTAGGTTCATGATTTTGAATTTTACAGCTTGGAATGAGGTTCAACGTGTCAATTGGATGACTACTTTAAAGCCTGGAGCAATGGATTAGCGAATAGAGAGCAGAGTGTGTATGTGGAGCTAGGGTCCCCTCTCCATTATGTTATCCTGATTAAGTCATTCATTGGGGCCTTGTTTTAAAGTTCTAAAGGCCCATTAAGTCTATAAGGGAAGATGTCTCACACTTCCGGTGTCCTGCCTGCCTTCCATTCCATCAAATCATTGTCTCCCGAGTTCAAGTTTGCTCATAACCCAAACCCTGTTCTTGTGGAAAAACGTGGAGATGTTAAATTTAAACGCAACAATCCGATTGGATCAAATGGTCTTGAGAATGGTACACTGGTAGGGGAGGTTTCCAAAGAAGTTAACGGTCGTGCTGGTGGCATGGATCTTTCTGATGAGGACTCGCCATATGGTGGAAAAGGTAGAGTGTTGAAAGACCGGCCATCTAATGCAGATGAAGACTCAGTATCTGCTTCATTGCCCCTGCCATCAATTTTGACATCATCTAGGGAAAGCAGGTGGAATGATACAAATGCTTATGGTTCAAAAAAGAAGCTTCAGTCTTGGCTTCAACTACCAAATGGGGACTGGGAGCTGGTAAATATAATAACAACTTCTGGAGCTGAATCTGTCATTTCACGGCCTGATGGGAAAGTTTTAAAGGTGAAAGAGGACAGTTTGGTGCCAGCTAATCCTGATATTCTTGATGGAGTGGATGACCTCATGCAACTAAGTTATTTAAATGAACCATCAGTTTTATTCAACCTGCAATATAGATACAATCAAAATATGATATATACAAAAGCTGGGCCTGTTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTCTGTATGGTAATGACTATATTGAAGCCTACAAGTGTAAATCAATCGAAAGCCCTCATGTTTACGCAATTACTGACACAGCCATCCGAGAAATGATACGAGATGAAGTGAATCAATCTATAATTATAAGTGGTGAGAGTGGAGCAGGGAAGACCGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTGGCTGGTGGAAGTGGAATAGAAAATGAGATACTAAAGACTAATCCAATACTTGAAGCCTTTGGTAATGGAAAAACATTAAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAAATTCACTTCAGTGAAACTGGAAAAATATCTGGTGCTAATATTCAAACATTTTTGCTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCATCATCTCTTAGGGAGAAGCTAAATCTACTAAGTGCGGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTGTTGATGATGCAGAAGAATTTCGCATGGTCAAGGAAGCTCTGGATGTTGTCCACATTAGCAAAGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTGGGAAACATATCATTTACTGTGGTTGATAATGAAAGGCATCTGATTGGATGTGAAATTGAAGACCTGAAGTTGACTTTATCTACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAGATGTTGACGCTATCTCAGGCTATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATGCATGTCTGTTTGATTGGTTGGTTGAACAAATAAATAAATCCCTTGCGGTTGGCAAAAGACGAACTGGCAGATCAATCAGCATTCTAGATATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAACAACACTTTAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTTGAATTTGAAGACAACCAAGATTGCCTTAATCTTTTTGAGAAGAAACCACTGGGGCTACTATCTCTGTTAGATGAAGAGTCAACTTTCCCTAATGGCACTGATTTAACGTTTGCTAACAAGCTTAAGCAGCATTTGAATTCCAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGCGTCATTATGCAGGGGAGGTCACTTATGATACATCTGGATTCCTGGAAAAGAATAGGGACTTATTGCACTTAGATTCCATCCAACTTTTATCCTCAAGCAAATGTCATCTTCCTAAGTTATTTGCATCTCATATGCTTACTCAGTCTGAGAAGCCACTGGTAGGTCCCTTACACAAGTCGGGTGGAGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGCTTGAAAAAGGACAGCCTCCTCTAAATATTAATGATCCTAATGATAAGTGTGGCATGGCTTGTCAACGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCCGCTCAAGATCCACTTAGTGTTTCAGTTGCCATTCTTCATCAGTTCAACATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAGCTATTCTTCCGACCAGGGCAGATTGGAGTGCTTGAAGATACCAGAAATCGTACTCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTTACCAAGCTCGTTGTTATCGCAAGGAGCTTTGGAGAGGAATCACTACTCTCCAATCATTCATCAGAGGGGACAAGAGTAGAAAGGAATATGCAGCTCTGCTTCAGAGATATAGAGCTGCAGTTATTATACAGAGGCGGATGAAAACAGTACTTGCAAGGAACAGAATGAAAAATATTAATGATGCCGCCGTTATCATACAATCATTTATTCGTGGTTGGTTAGTCAGAAGATGTTCAGGAGATATAGGACTATCAAAATCACGAGGCATTGAGACTAATGAGTCAGATGAGGTTCTGGTGAAGTCGTCTTTCCTAGCTGAATTACAACGCCGGGTGCTTAAGGCAGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATTCTTCACCAACGTCTTCAACAGTACGAGACCAGATGGTCTGAATATGAGTTGAAGATGAAATCCATGGAAGAAGTATGGCAGAAACAAATGAGGTCCCTACAATCTAGCCTATCTATTGCAAAGAAGAGCCTTGCGATGGATGATTCTGAAAGAAATTCAGATGCTTCAGTTAATGCAAGTGATGACAGGGATTTCAGTTGGGATGTAGGAACCAATCACCGGCGCCAAGAAAGCAATGGGGCAAGATCAATGAGTGCTGGTTTGAGTGTTATAAGTCGATTGGCTGAAGAATTTGAGCAGAGGAGTCAAGTGTTCGGTGATGATGCCAAGTTCTTGGTAGAGGTAAAGTCTGGTCAAGTTGAAGCAAGTTTGAACCCAGATAGAGAGCTTAGAAGGTTAAAACAAATGTTTGAAGCTTGGAAAAAGGATTATGGCGCAAGACTGCGTGAAACAAAGGTCATTTTACATAAACTTGGAAGTGAAGATGGATCAATTGAGAAAGCGAAAAAAAGTTGGTGGGGAAGAAGGAATAGTACAAGAATAAGTTGATTTATTTATTTTTCTTACTGGGGTTTGGCTTTGGTGTATGCACTGTGTTAAGGGCATTGCATTGCCAATTATATGTCGGAAAATACGATAGGAAAGATAAGATAGGAGTAGGAAGAGTCCAGGGAGAATGAATTACTGGTTACTGTAATTAGGTTAGCTGTTGCTAGCCACTTTTATTTATGAGAAATTTCTGGACCAGTTGTGGAGCTAACTCACTACGAGTCTTGTGATTCATTTGGTCTTCGTATGTGAATTGCATTGCTTGTTAAAAAATAGCGAGTTTTC 4348 0.4013 MSHTSGVLPAFHSIKSLSPEFKFAHNPNPVLVEKRGDVKFKRNNPIGSNGLENGTLVGEVSKEVNGRAGGMDLSDEDSPYGGKGRVLKDRPSNADEDSVSASLPLPSILTSSRESRWNDTNAYGSKKKLQSWLQLPNGDWELVNIITTSGAESVISRPDGKVLKVKEDSLVPANPDILDGVDDLMQLSYLNEPSVLFNLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNDYIEAYKCKSIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALAGGSGIENEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLLSAEDYKYLRQSNCYSITGVDDAEEFRMVKEALDVVHISKGDQENVFAMLAAVLWLGNISFTVVDNERHLIGCEIEDLKLTLSTRKMKVGNDNIVQMLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVRHYAGEVTYDTSGFLEKNRDLLHLDSIQLLSSSKCHLPKLFASHMLTQSEKPLVGPLHKSGGADSQKLSVATKFKLEKGQPPLNINDPNDKCGMACQRRYGFLLLENVAAQDPLSVSVAILHQFNILPEMYQVGYTKLFFRPGQIGVLEDTRNRTLHGILRVQSCFRGYQARCYRKELWRGITTLQSFIRGDKSRKEYAALLQRYRAAVIIQRRMKTVLARNRMKNINDAAVIIQSFIRGWLVRRCSGDIGLSKSRGIETNESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYETRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSERNSDASVNASDDRDFSWDVGTNHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSIEKAKKSWWGRRNSTRIS 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00343 1117 Gene3D - 734 790 - -
Pste4g00343 1117 ProSiteProfiles IQ motif profile. 866 895 IPR000048 GO:0005515
Pste4g00343 1117 PANTHER MYOSIN 172 715 - -
Pste4g00343 1117 MobiDBLite consensus disorder prediction 979 1016 - -
Pste4g00343 1117 SMART iq_5 865 887 IPR000048 GO:0005515
Pste4g00343 1117 SMART iq_5 816 838 IPR000048 GO:0005515
Pste4g00343 1117 SMART iq_5 793 815 IPR000048 GO:0005515
Pste4g00343 1117 SMART iq_5 842 864 IPR000048 GO:0005515
Pste4g00343 1117 Gene3D - 845 885 - -
Pste4g00343 1117 Gene3D Myosin VI head, motor domain, U50 subdomain 418 512 - -
Pste4g00343 1117 MobiDBLite consensus disorder prediction 66 101 - -
Pste4g00343 1117 Gene3D - 796 844 - -
Pste4g00343 1117 Gene3D Kinesin motor domain 178 534 IPR036961 -
Pste4g00343 1117 MobiDBLite consensus disorder prediction 78 95 - -
Pste4g00343 1117 ProSiteProfiles IQ motif profile. 796 823 IPR000048 GO:0005515
Pste4g00343 1117 FunFam Myosin heavy chain 361 417 - -
Pste4g00343 1117 Coils Coil 912 960 - -
Pste4g00343 1117 Gene3D - 361 417 - -
Pste4g00343 1117 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 PRINTS Myosin heavy chain signature 576 604 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 PRINTS Myosin heavy chain signature 523 551 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 Pfam Myosin head (motor domain) 181 714 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 ProSiteProfiles Myosin motor domain profile. 179 714 IPR001609 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 Gene3D - 535 683 - -
Pste4g00343 1117 CDD MYSc_Myo8 193 780 IPR036022 -
Pste4g00343 1117 ProSiteProfiles IQ motif profile. 819 846 IPR000048 GO:0005515
Pste4g00343 1117 FunFam Unconventional myosin-XIX 535 719 - -
Pste4g00343 1117 Pfam IQ calmodulin-binding motif 798 813 IPR000048 GO:0005515
Pste4g00343 1117 Pfam IQ calmodulin-binding motif 868 884 IPR000048 GO:0005515
Pste4g00343 1117 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Pste4g00343 1117 MobiDBLite consensus disorder prediction 979 993 - -
Pste4g00343 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 842 IPR027417 -
Pste4g00343 1117 SMART MYSc_2a 173 793 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00343 Pste-Chr4 2658406 2671858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00343 1 1115 Myosins gene family AT1G50360 70.508 0.0 1625
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00343 4 2658406 2671858 Pste4g00343 4 2658406 2671858 ECH