Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00335 AGTACATAACTCAGCAGGCTCAAGAGCTTTCTGAAATGGATAGGTGCTGGTTTAATAAGTTCAAACCAAAGGATAAAACACAGTCTTCAAAAAACAGGGAAACTACAGGCATTGCGAAAGAAGGATCAAAACCCCAGACAAATGAAGAAGCACCTTCCAATGTGACCAAACAGAAGGTTGCAGCTGCAAAGCAGTACATAGAAAACCATTATAAGAAACAGATGAAGGATTTGCAGGAGAGAAAGGAAAGACGTAATATGCTAGAAAAAAAGTTGGCTGATGCTGAAGTCTCTGAGGAAGAGCAGAACAATGTACTTAAATATTTTGAGAAAAAGGAAAGAGAATACATGCGTCTTAAGAGGCATAAAATGGGGGCTGATGATTTTGAGCCCCTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTCAGAGTATGCCGAGAGAAAGCAACTGGTCATGTATATGCAATGAAGAAACTTAAGAAATCAGAGATGCTTCGTAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAATCTGCTTGCTGAAGTTGACAGCAATTGCATTGTAAAGCTTTATTGTTCCTTTCAAGATGAAGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGTGATATGATGACGTTGCTCATGCGGAAGGATATACTGACAGAAGATGAGGCCAGGTTCTATGTTGGGGAGACTGTCCTGGCTATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTAGATAGAAATGGTCACATGAAATTATCAGACTTTGGATTATGTAAACCGCTAGACTGCAGTAATCTTCAGGAGAAGGATTTCTCTATTGGAAGCAACAGAAGTGGAGCCCTTCAGAGCGATGGACGTCCTTTGGCTCCTACAAGAAGCCAGCAGGAGCAACTGCAGCATTGGCAGAAAAATAGGCGAATGCTTGCCTATTCTACAGTTGGAACACCAGACTATATTGCCCCCGAAGTTCTTCTAAAGAAAGGATATGGCATGGAATGTGATTGGTGGTCCCTGGGAGCGATAATGTATGAAATGCTAGTGGGGTATCCTCCCTTTTATTCAGATGAACCAATGTTGACTTGTAGAAAGATAGTAAATTGGAGAAATTATTTAAAATTTCCAGAAGAAGTAAAGCTTTCAGCAGAAGCAAAGGATCTTATTAGTAGACTTCTATGTAATGTGGATCAGAGGCTTGGAACCAAAGGGGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGCATTGAATGGGACAAATTGTACCAAATGAAGGCTGCCTTTATTCCTGAGGTTAACGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAACTCAACCTTCCTCAAAATCAGGCCCATGGAGA 1427 0.405 MDRCWFNKFKPKDKTQSSKNRETTGIAKEGSKPQTNEEAPSNVTKQKVAAAKQYIENHYKKQMKDLQERKERRNMLEKKLADAEVSEEEQNNVLKYFEKKEREYMRLKRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGSNRSGALQSDGRPLAPTRSQQEQLQHWQKNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMLTCRKIVNWRNYLKFPEEVKLSAEAKDLISRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQTQPSSKSGPWR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00335 464 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 464 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pste4g00335 464 CDD MobB_NDR_LATS-like 51 112 - -
Pste4g00335 464 FunFam Non-specific serine/threonine protein kinase 88 200 - -
Pste4g00335 464 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 448 - -
Pste4g00335 464 MobiDBLite consensus disorder prediction 20 47 - -
Pste4g00335 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Pste4g00335 464 ProSiteProfiles Protein kinase domain profile. 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00335 464 Gene3D Phosphorylase Kinase; domain 1 107 202 - -
Pste4g00335 464 PIRSF ILK 43 396 - -
Pste4g00335 464 PIRSF ILK 8 90 - -
Pste4g00335 464 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Pste4g00335 464 ProSitePatterns Protein kinases ATP-binding region signature. 123 146 IPR017441 GO:0005524
Pste4g00335 464 MobiDBLite consensus disorder prediction 280 300 - -
Pste4g00335 464 SMART serkin_6 117 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00335 464 MobiDBLite consensus disorder prediction 1 19 - -
Pste4g00335 464 Gene3D Transferase(Phosphotransferase) domain 1 203 433 - -
Pste4g00335 464 FunFam Non-specific serine/threonine protein kinase 201 268 - -
Pste4g00335 464 MobiDBLite consensus disorder prediction 1 47 - -
Pste4g00335 464 SUPERFAMILY Protein kinase-like (PK-like) 91 456 IPR011009 -
Pste4g00335 464 Coils Coil 59 86 - -
Pste4g00335 464 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00335 464 CDD STKc_NDR_like 115 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00335 Pste-Chr4 2627840 2631083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00335 3 464 AGC Kinase Gene Family AT4G14350 83.983 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pste4g00335 Pkinase 2.4e-64 CL0016