Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00330 GGTTAATTCTATAGATACAATTTAATCCTCATCTAATCTTATATTTGATTTGGTTTTCTATGTACTATCCGTATCTGTCTCTCCCTCACTTTGTTTTCTTTTTCCGCTGAAAATTTTTCAATAAAATCCACTGTCTGTCCTCAAAGACAGATCCGAGAATATCGTACCCATTAGATTCCTTTTCCTTCCTCCTTCTACATTTTCGCAAATTTTCACAGTATTCGCCGCTATAGAGCACACTATAGTTTATCTACTCACTGTTACTCCAATTTTCAAAGACATAGTTTATCCGAAACCCCAGAATCGCTATTGTGGTTCGATTCAACGAGCAGTGGGTCTTTGGTAGTTCTAGTTCCTGGTCTTTTTTTCATTGATCAAAAGTTTTTATTTTTGCTGAATTTTGAGATATTGGGTTTAGCATAGCCTGAAATTTTGAGTTATTAAATTCACTTTCGGATCTCTGTGTTAGCGGTAAATCTCGTCGGATCTACGATTGTGCTGTAAATAAAGATGAGTCGTTGATGAGATACTCGGATTAGGGATTTTTTATTTAATTGAGCTGTGTAGTAGAGTGTTTTTTAATTTAACGAGGATCAAGAGATTGGGTTTGTATCATGGATCACGTTATCGGTGGAAAGTTCAAGCTTGGGAGGAAGATTGGGAGTGGATCGTTTGGAGAGCTTTACTTAGGTGTTAATGTACAAAGTGGAGAGGAAGTGGCCGTCAAGCTGGGCAGAGGGGAATATTTGCAGATATTGTGCATGCTTCTTTTGCCTGAAAATGTGAAGACCAAGCACCCCCAGCTTCACTATGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACTGGTATACCCCATCTAAAATGGTTTGGAGTTGAGGGTGAGTACAATGTAATGGTTATTGACCTCCTTGGGCCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGAAAATTCTCTCTGAAAACAGTTCTTATGTTGGCAGATCAGCTAATAAACAGAGTTGAGTACATGCACTCCCGGGGTTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTAGGCCGTAAGGCAAATCAGGTATACATCATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTTCAAACACATAAGCATATACCATACAGGGAAAACAAAAACCTCACTGGAACTGCTCGGTATGCAAGTGTTAATACCCATATGGGAGTTGAACAAAGCAGAAGAGATGATTTAGAATCTCTCGGTTATGTGCTCATGTACTTTTTGAGAGGAAGTCTCCCATGGCAAGGCTTGAAAGCTGGCACTAAAAAGCAAAAATATGACAAAATAAGTGAAAAGAAGATGCTTACTCCTATAGAGGTCCTATGCAAGTCATATCCATTGGAATTCACATCATACTTCCACTACTGCCGAACATTGCGGTTTGAAGATAAGCCTGATTATTCTTATCTTAAGAGACTCTTTCGGGACCTATTCATCCGAGAAGGCTATCAGTTTGACTATGTATTTGATTGGACTATGTTGAAGTATCCACAGATTGGATCTAGTTCTAGAGCTCGACCAAGTGGGAAACCGGTCATAAACCCAGGACAATCTGGAGAGAGAACAGACCGGCCTTCAGGGGGACCAGAGATTCGGGATAGATTCTCTGGTGCAGTTGAGGCATTTGCAAGGAGGAATGGCTCTGGACTTGGTCTGCATAATGATCATTCTAGGCATCATAGGTCTTCAGATGACGTGCCTTCTTCCAAAGACATGCAAGGTGATTCTGAGAGGCCTCGTAGCTCTTCTCGTAACGGTATTTCTTCAAAAAAGCCTATCTTTTTAAGCAGCCGGCCAAGCTCATCTGGTGAACCTAGTGAAAGCCGTGCTAGCCGATTGGTCTCTAGCAGTGGCCGACTATCAACAACTCAGAGACTTCAACCTGGTTTTGAGTCCAAAACATCGTTATCTCGTGCTTCAGCAACAAGAGGTGGTCGTGATGATACACTCAGGAGCTTTGAACTCCTGTCACTTGGTACAGGAAAAAGGAAATGAAGAACTGTTTAATTACTCTGCCCTGACTTTCCTTTGAGATGCCTACACATGTTGATTACCCTGTATATTTCCATCCAATGTTGGTTCCTTTCAAGGCTAAAGCTCATTGAAACTTCTTCAAGAAGATTTGGCAGACTCTTCTTATACACCTCTTTGGGTGTTCTTCCATGATTATTTCAGCATGGACCCATTCATGAAGAGATCCTATGTTGCTTAAGGAATTTGTTAATATCTGGCTACTTGTAATAATAAATATGTTCTTTATTTTTCTGTTGAAGGAAAGGAAAAGAATCTGCAAAAATGCTTTTGGAAGTTTTGCACCCTTTCTATGCATATTTCCTACCCAACTATTTCAGTATTTTGCTCTATTGTACATTTGAGGAAATGGAATTGTCATTTTGTTGGCTCTAATTACGGATAAGAGAAAGAAAAGATTTTGACGTGCATATCTTTACAAAACACTGGATGTAACTGGTACACTTGAGATTCTCTTTACTGAATAATCGAGGCCAGCTAGGTTAGGTTGGAGATCATTGAGCTTTAGCAACAAAATTATATGTTTGGCC 2617 0.3963 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLGRGEYLQILCMLLLPENVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHMGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPLEFTSYFHYCRTLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTMLKYPQIGSSSRARPSGKPVINPGQSGERTDRPSGGPEIRDRFSGAVEAFARRNGSGLGLHNDHSRHHRSSDDVPSSKDMQGDSERPRSSSRNGISSKKPIFLSSRPSSSGEPSESRASRLVSSSGRLSTTQRLQPGFESKTSLSRASATRGGRDDTLRSFELLSLGTGKRK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00330 478 ProSitePatterns Serine/Threonine protein kinases active-site signature. 139 151 IPR008271 GO:0004672|GO:0006468
Pste4g00330 478 MobiDBLite consensus disorder prediction 393 456 - -
Pste4g00330 478 SMART serkin_6 9 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00330 478 CDD STKc_CK1_delta_epsilon 8 297 - -
Pste4g00330 478 Gene3D Transferase(Phosphotransferase) domain 1 1 338 - -
Pste4g00330 478 FunFam Casein kinase 1-like protein 1 344 - -
Pste4g00330 478 Pfam Protein kinase domain 10 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00330 478 ProSiteProfiles Protein kinase domain profile. 9 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00330 478 MobiDBLite consensus disorder prediction 365 392 - -
Pste4g00330 478 MobiDBLite consensus disorder prediction 314 346 - -
Pste4g00330 478 MobiDBLite consensus disorder prediction 361 461 - -
Pste4g00330 478 PANTHER CASEIN KINASE-RELATED 9 395 - -
Pste4g00330 478 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pste4g00330 478 SUPERFAMILY Protein kinase-like (PK-like) 4 305 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00330 Pste-Chr4 2587503 2593447 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00330 8 228 MAP Kinase Kinase Kinase AT3G06030 25.221 1.52e-14 74.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pste4g00330 Pkinase 9.5e-24 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00330 4 2587503 2593447 Pste4g00330 4 2587503 2593447 ECH