Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00319 TTGGGAACCGAAATTCCAAGCCAAATGATTTTGTGGGGTGATCGAGGTTGGTTTCTAGTCTACAATATTATACTAACAGGTGTTATTGTTATTTTCCAAGCTTGTGCTGGTACCAGAAAGAAAAATGCCATGATATATTGGGAGGAGCCTTCTGGTACAATAGCAATTGAAGATGTACGGAGGGGAGTGAAAATGTTGAAGGCCCTGTTTGGACATAATAATTTGGTCAAATTTTATGATGCATTTGAGAATGTCAACAACGTCTACATTGTTATGGAGTATATTTTATCCCAGTGTAGTTTAGGATCATATCTACAAAATGTTGTTTTATGTTTGTATATTTTTTTACCTCTAATATTTTTTGTCGCTTTGCAAAATTTTCTTTATGTCTCTAAAAATGATGATGTTGTGATGAAAGTTATTGATCTTGGGCTATCTGATTATGGAGGCAAGCTGTTTCAAGACTCACTAATAACATGTGTTGAGATTCATACTAAACTAAAATATTTATTTTCAGTACCAGTACTGGCTTCCAATAAAATGCAGATCAACACCTTAATATGGAAGTGCCTACTACGTTGCACCCGAGAAGCTAAAGACTTTGTGAAGAGACTTCTAAACAAGGATACCAGGAAAAAGGATGACTACTGCTCAAGCTTTAGGCAT 666 0.3529 LGTEIPSQMILWGDRGWFLVYNIILTGVIVIFQACAGTRKKNAMIYWEEPSGTIAIEDVRRGVKMLKALFGHNNLVKFYDAFENVNNVYIVMEYILSQCSLGSYLQNVVLCLYIFLPLIFFVALQNFLYVSKNDDVVMKVIDLGLSDYGGKLFQDSLITCVEIHTKLKYLFSVPVLASNKMQINTLIWKCLLRCTREAKDFVKRLLNKDTRKKDDYCSSFRH 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00319 222 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 95 - -
Pste4g00319 222 SMART serkin_6 18 217 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00319 222 Gene3D Phosphorylase Kinase; domain 1 29 95 - -
Pste4g00319 222 SUPERFAMILY Protein kinase-like (PK-like) 53 216 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00319 Pste-Chr4 2487800 2491881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00319 53 222 EF-hand Containing Proteins AT2G46700 32.727 4.87e-21 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste4g00319 None None None