Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00316 ATGCTGATGTCACTAAAAGCAGGAAACCTAGGTTTGAATATGGTTGCTGCATGTCACGTTATTCTTTTGGATCTTTGGTGGAATCCCACGACTGAAGATCAAGCTATTGATCGAGCTCATAGAATCGGACAAACTCGTCCTGTTACTGTGACACGAATCACTATAAAAGATACTGTTGAAGATAGGATACTGGCTCTTCAGGACGAAAAGAGAAAAATGGTTGCATCTGCTTTTGGGGAAGACCATGCTGGGGGTTCTGGAACTCGACTCACAGTGGATGATCTGAAATATCTTTTCATGGTCTAGACTCTAGACCTCTCCTTTGTTGTTCTTCCCATGATGGATGATTTGAAGTTTTGTTTTGTTTTGGGCGGTTTGGAATGGAATTAAGATGGGTTCTTAAGGAGGGTATGGCTGTTTTTCAGTGCCTGTTGACATCCGTTGCATGAGTTGGCAGGCGAGGCTTGGTTGATCCAAATGTTAACTTGATCTGTTCTGAAGCCCACAAGGGCATTTTTGTCCTCCAAACTGCTATATAGCTGAAGGTTGTCTGTAAATATACTAATTAAATTATGATTTATGAATATATGACCTTGTGCAACTGCCCTTTCTGTTGTACAGTTTTCTTTATAGTCTTCAACTGTACACTTTTGAATTATTGATTATACCGTGGAGCTAGCTGCTAGCCTCCATGCTTTTGTCCGCCCCC 709 0.4147 MLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQDEKRKMVASAFGEDHAGGSGTRLTVDDLKYLFMV 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00316 101 Pfam Helicase conserved C-terminal domain 2 43 IPR001650 -
Pste4g00316 101 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pste4g00316 101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 100 IPR027417 -
Pste4g00316 101 CDD SF2_C_SNF 1 52 - -
Pste4g00316 101 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1 96 IPR001650 -
Pste4g00316 101 Gene3D - 1 99 IPR027417 -
Pste4g00316 101 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00316 Pste-Chr4 2464482 2465542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00316 1 100 RAD5 or RAD16-like Gene Family AT1G61140 80.000 2.04e-53 176