Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00277 TTAGAGTTGAGAGTTGAGAGTTGAGAGAGGACAAAGATGGTGAACGTGGTGGAATTGCAGAAACAGTTGCAGAGGTTGCAGCAGAGTGGGAATGTCAATATTGATGCCAATGGAGAAGTCATGTATGTCAAAGTCATGACTGATGAACAGTTAGAAACTCTGAGGAAGCAAATTGCAGTTTATGGCACTATTTGTGAGCAACTTATTGAGATGCACAGAACACTCTCAGCTCAACAGGATCTTGCAGGGGTTAGATTAGGAAACATATACTGTGACCCATTGATGACATCTGGTGGGCACAAAATAACATCGAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAAATTCTTGAACGTATATTTGATCAAGGGAATGGAACTCCAAGCAAGGAAAAAATCAAGGAGATCGCTGCTGAATTGGGCCAACATGGCCAAATTTCTGAAACAAATGTGTATAATTGGTTTCAGAATAGGCGTGCTCGATCCAAGCGAAAACTGCAAAATGTGGCTCCTACCAACACTGAATCAGAAGTGGACACCGAGGTTGATTCTAAGGATAAGAAGACAAAACCTGAGGAGTTTCAATCCCAACATAACATAACTTCTGGAGGGGCCCAAAAGTTGTGCTTCCAGAACCCTCAACTATACTCTGAATTGCAGTACTTGAACCCTGATTCCAACAAACCATATCCCATGTTCCCATCAGATGACAGTCTGAAATCCACAAGAAATTCGAGTCATGCGTCTGTTTTTAATGAGGTGCTGTCAAACTCAAGGAATGAGTATGTAGGTGGGAAAATGGAAGTTGGTGGGAGTGTGAGCTACAATGTATTCCACCAACAAACAGGAGACTGCAATCTGGCGGGTGGAAATTTAGTTTGAGCTGTAAAGAACTGTGAGTGTGCTGGAGCTGGTTGAGCTTGTGTTCATGTTCATCACAAACAATCATAACTCCATGTAATATTTTACCCAAAATCTGTCCAGAGAATACTATAAAAATGTGAAGTTGGCTTCTTGGTAGCCGCTTCACTATGTTTCTACTGTCACAACTTTTGTTTTTGAAACCCACTTCTGAAGGGATTGCTAATTAGTTTATTACGCCTATATACATATATACTCATTGTCTTCAC 1133 0.4139 MVNVVELQKQLQRLQQSGNVNIDANGEVMYVKVMTDEQLETLRKQIAVYGTICEQLIEMHRTLSAQQDLAGVRLGNIYCDPLMTSGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEIAAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPTNTESEVDTEVDSKDKKTKPEEFQSQHNITSGGAQKLCFQNPQLYSELQYLNPDSNKPYPMFPSDDSLKSTRNSSHASVFNEVLSNSRNEYVGGKMEVGGSVSYNVFHQQTGDCNLAGGNLV 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00277 282 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Pste4g00277 282 CDD homeodomain 93 154 IPR001356 GO:0003677
Pste4g00277 282 SUPERFAMILY Homeodomain-like 91 155 IPR009057 -
Pste4g00277 282 MobiDBLite consensus disorder prediction 152 190 - -
Pste4g00277 282 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Pste4g00277 282 SMART HOX_1 91 158 IPR001356 GO:0003677
Pste4g00277 282 Gene3D - 95 159 - -
Pste4g00277 282 MobiDBLite consensus disorder prediction 167 183 - -
Pste4g00277 282 PANTHER WUSCHEL-RELATED HOMEOBOX 13 15 268 IPR044559 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00277 Pste-Chr4 2241143 2243525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00277 29 267 Wox Gene Family AT4G35550 52.326 2.80e-80 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste4g00277 Homeodomain 1.9e-19 CL0123