Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00260 ATGGCAATCTATAGAATTGCAATTGGGTCGCCTAGAGAGGCTAGCAATCCTGCTGCAATCAGAGCAGCGTTTGCTGAGTTCTTCTCTATGCTTATTTTTGTTTTTGCAGGACAAGGCTCTGGCATGGCCTATAGTCAGTATCCTGCACAATTCTCTTTATTAAGCAAACTTACCGGCAATGGACCTGCAACTCCTGGCGGTCTCATAGTTGCATCATTGTCCCATGCATTTGCGCTTTTTGTGGCGGTTGCTGTGGGAGCAAACATTTCTGGTGGGCATGTCAACCCTGCAGTCACATTTGGTGCTTTCATAGGAGGAAACATAACCCTCTTGAGAAGTATTTTGTATTGGATTGCACAGTTACTTGGTTCAGTTGTTGCTTGCATTCTTCTAAATGTTGCTACTGGAGGGATGGAAACATCAGCTTTCTCTCTGTCCTCTGGCGTGTCAGTGTGGAATGCAATAGTTTTTGAGATTGTGATGACTTTTGGTTTGGTGTATACAGTTTATGCCACAGCGGTGGACCCAAAGAAGGGGAATGTGGGTGTTGTTGCTCCAATAGCAATTGGGTCCATTGTGGGAGCCAACATCTTGGTTGGTGGGGCTTTTGATGGCGCATCTATGAACCCAGCTGTGTCCTTTGGGCCAGCTGTGGTTAGCTGGTCATGGACTCATCACTGGGTCTATTGGCTTGGTCCATTCATTGGCTCAGCTGCTGCTGCCATTCTCTATGATAATATCTTTATTGGTGATGATGCTCATGAACCCCTCACAACTAGTGATTTCTAG 789 0.4601 MAIYRIAIGSPREASNPAAIRAAFAEFFSMLIFVFAGQGSGMAYSQYPAQFSLLSKLTGNGPATPGGLIVASLSHAFALFVAVAVGANISGGHVNPAVTFGAFIGGNITLLRSILYWIAQLLGSVVACILLNVATGGMETSAFSLSSGVSVWNAIVFEIVMTFGLVYTVYATAVDPKKGNVGVVAPIAIGSIVGANILVGGAFDGASMNPAVSFGPAVVSWSWTHHWVYWLGPFIGSAAAAILYDNIFIGDDAHEPLTTSDF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00260 262 PANTHER AQUAPORIN-8 6 256 IPR034294 -
Pste4g00260 262 SUPERFAMILY Aquaporin-like 16 250 IPR023271 -
Pste4g00260 262 Gene3D Glycerol uptake facilitator protein. 4 262 IPR023271 -
Pste4g00260 262 ProSitePatterns MIP family signature. 93 101 IPR022357 -
Pste4g00260 262 CDD MIP 21 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 FunFam Probable aquaporin TIP1-1 4 262 - -
Pste4g00260 262 Pfam Major intrinsic protein 15 244 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 227 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 190 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 157 175 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 75 99 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste4g00260 262 PRINTS Major intrinsic protein family signature 112 131 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00260 Pste-Chr4 2126012 2127123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00260 1 262 Major Intrinsic Protein MIP AT4G01470 79.771 1.95e-148 413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00260 4 2126012 2127123 Pste4g00260 4 2126012 2127123 ECH