Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00255 ATGATGGTATCGAGGGGACTCTTTGGATGGTCCCCGCCACACATACAGCCTCTCACGCCGGTCTCCGAGGTCTCCGAGCCGCCGGAGTCTCCGTCGCCGTACCTCGACCTCGGCGCCGAGACCTCCGCCTCGCAGCCCATGGAGGTCGAGGAGGAGATGGAGGAGGTCGACGAGATTGAGCCGCCGCCAGCAGCCGTTCCTTTCTCTCGCCTCTTCGCCTGCGCCAACCGCCTCGACTGGTTTCTCATGCTCATCGGCTCTCTCGCTGCTGCCGCGCACGGCACCGCTCTCGTCGTTTACTTGCACTACTTCGCCAAGGTTCTCCGGGTTCCTCAGCAGGGTTCGCCAGAAGAACAGTTTCATAGGTTCAAGGAGGTTCGATTTCGCTTCAAAACCCTACTTGCTTTAACCATTGTTTATATTGCTGGAGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCGTGTTGGATTCTTACTGGAGAACGGCAGACTGCTGTTATCAGATCAAGATATGTCCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACTTACGGAAATAATGGAGACATTGTGAGTCAAGTATTGAGTGATGTGCTGCTCATTCAGTCTGCTCTTAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTCCATAGGCTTGCTGAGAATATTCAAGATGCATATGCTGAAGCTGCTAGCATTGCTGAACAGGCAGTTTCCTACATAAGGACGTTGTATGCATTTACTAATGAAACATTGGCTAAATATTCATATGCAACATCGCTGCAAGCCACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGCCTTGGTTTTACATATGGGCTGGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGCTCTTGGTTATACATGGAAAAGCTCATGGTGGTGAAATTATAACAGCTCTATTTGCTGTGATTCTAAGTGGCTTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTATTTGAGATGATAAGCCGGTCATCCTCATCCTTTAATCATGATGGCAGTGCTCCAGCTTCTGTGCAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCTCGCCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAAAAAACTGTGGCGCTTGTTGGCAGAAATGGCTCTGGAAAAAGTAGTATTATTCCCCTCATGGAGCGGTTTTATGATCCAACATTAGGGGAAGTCCTTTTAGATGGTGAAAATATAAAGAATATGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCTTATGGGAGAGATACTACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCGTTAGATAAAGGCTATAACACACAGATTGGCAGGGCTGGTCTAGCTTTGACCGAAGAGCAGAAAATAAAACTTTCTATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTTACTGGCGGACTTGATTTTGAGGCAGAGAGGTCTGTTCAGGAGGCTCTAGATCTCCTCATGTTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCTGATTATATAGCTGTTATGGAGGATGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTACTGACCCTGGATGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTACCCAAGAGGATGCCTGTACGAAACTACAAAGAGACTACAACTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCACAGCTTCAAAGAACCTTCATCTCCTAAAATGATAAAGTCGCCCTCTCTTCAAAGAGTTTCTGCCATCTTTCGGCCTTCAGATAGCTTCTTTAACTCACAAGAATCACCCAAAATTCGGAGCCCACCATCTGAAAAGCTGTTGGAAAATGGCCAGTCTTTAGATTCAGCAGATAAGGAGCCATCAATAAAAAGGCAGGATAGTTTTGAAATGAGACTGCCAGAGTTACCCAAGATTGATGTTCAATGTGTGCACCGACAAACATCAAATGGGTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAACTGAACGCTCCCATTCACAGACTTTTAGCAGGCCGGATAGTCATTCTGATGATCTTTCAGTGAAAACGAATGAAACGAAGGATGCAAGGCATCGAAAACAGCCCTCAATTTGGAGGCTAGCAGAGCTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGCGCTGCTATCTTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGCTTGGTGGTGACAGATTACTATAAAATTGATGAAAGTCATCACTTACGAAGTGAGATAGACAAATGGTGCATGATCATTGCTTGCATGGGTATTGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGATGGTTTGATGAAGAGGAAAATAGTGCCGACAATTTATCCATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCAGCTTTCAGTAATCGACTTTCCATATTTATACAAGACAGTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTTTTACTGCACTGGCGATTAGCACTTGTGGCTTTAGCAACACTTCCAGTTCTTTGTGTTTCTGCTGTTGCCCAGAAATTGTGGCTTGCTGGATTTTCAAAGGGCATACAGGAAATGCACAAAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAATATTTACACTGTTGTTGCATTTTGTGCTGGTAATAAGGTGATGGAACTCTACCAATTGCAGTTAAATAAAATATTTAAGCAAAGCTTTCTTCATGGAGTGGCCATTGGTTTTGCATTTGGCTTTTCGCAGTTTCTGCTCTTTGCTTGTAATGCCCTTCTCCTTTGGTACACTGCAATTTGTGTAAAAAATAGTTATGTGAATCCACCCACTGCTCTCAAGGAGTATATGGTTTTCTCATTTGCTACATTTGCCCTTGTGGAGCCTTTTGGGTTGGCACCTTACATACTTAAGCGACGTAAATCTCTCTTGTCGGTATTTGAAATTATAGATCGTGTGCCTAAGATTGATCCTGATGATAACTCAGCTATGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGACCAGAAGTGTTGGTATTAAGCAATTTTAGTCTCAAAGTCAATGGAGGACAAACAATTGCTGTAGTGGGAGTTTCGGGGTCAGGGAAGAGCACAATAATATCTTTGATTGAGAGATTCTACGATCCAGTTGCTGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAACAATATAACTTGAGATGGTTGAGGAGCCACCTTGGTCTGGTTCAGCAGGAGCCAATTATCTTCTCAACAACAATAAGGGAAAACATCATATATGCCAGGCATACTGCCAATGAAGCTGAAATGAAGGAGGCTGCAAGAATAGCAAATGCTCATCACTTTATTAGTAGCTTGCCTCATGGTTATAACACTCATGTTGGGATGAGAGGTGTCGACTTAACTCCAGGACAAAAACAGAGGATTGCAATTGCAAGGGTAGTGCTTAAAAATGCTCCTATTTTGTTGTTGGATGAAGCTAGTTCATCAATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCTCTAGACACCCTAATAATGGGAAATAAGACCACTATTTTAATAGCACACAGAGCTGCTATGATGAGGCATGTGGACAACATAGTAGTTCTAAATGGAGGAAGGATAGTGGAGGAGGGGACCCATGACTCATTGGTGGCAAAAAATGGTCTCTATGTCCGATTGATGCAACCTCATTTTGGTAAGGCTTTGCGTCAGCATCGGCTTGTTTAGAATCGGGGTATGTAATATGGGTAGTGGCAACTAATGTGGGTTCATGAGAGAATTGTTTCATATACTACTTGGGTTGAATGTCTGGTGATTGCTGCACCTGATGGAATTTTCCAATGTCAGGTGAAGGCTTGCATGCTGCACGAATGGGAGTATTGGATCAGCACTCGGCTTTGGTAGGCATAGGAAGAGGGTACTGTGGCAGGGGTAGTGTAGGATTTAAATATAGGAATTTGGAATTTGGAATTTGGAATTTGGTTGATTTGAGTATTGAAGCTGTGGATGCATATTCTTTTGGAGACAAGCAGTTTGGACTTTGGACTGACGGTTGTCTCTGCGGTATACTGATTTTGTTTTACAAAGAGATGAAGGCGGCCGAATCAAACACTAATTCAGCTGAGTTACTCTTCTCTTGTGGACTTCCTTTTCGCTCCTGTCTCATGCGTGGATGATGAACTTGTTCACTACTGTAGTTTTTTTCCTTCATTTGTGAAAAGTGTAGAAAATACAGTTCCAAGTGTTGTAAAACTCCTGTATATACATAGCATTAGTTTAGAAGCAATTCCTTTAGTGCTTGAATTACACGGGTTCTCGGGTTTTTTCTTGGTCCTTGGATAATATATGCAAATTTCCACGTGTATTTTGTCAACCAGTTTAGACCATTCTTATAGTTTTTTATTTATATATTAATCTGCG 4917 0.4222 MMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSASQPMEVEEEMEEVDEIEPPPAAVPFSRLFACANRLDWFLMLIGSLAAAAHGTALVVYLHYFAKVLRVPQQGSPEEQFHRFKEVRFRFKTLLALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFNHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNMKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDKGYNTQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETTTFQIEKDSSESHSFKEPSSPKMIKSPSLQRVSAIFRPSDSFFNSQESPKIRSPPSEKLLENGQSLDSADKEPSIKRQDSFEMRLPELPKIDVQCVHRQTSNGSDPESPVSPLLTSDPKTERSHSQTFSRPDSHSDDLSVKTNETKDARHRKQPSIWRLAELSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTDYYKIDESHHLRSEIDKWCMIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRLALVALATLPVLCVSAVAQKLWLAGFSKGIQEMHKKASLVLEDAVRNIYTVVAFCAGNKVMELYQLQLNKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICVKNSYVNPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLLSVFEIIDRVPKIDPDDNSAMKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHTANEAEMKEAARIANAHHFISSLPHGYNTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00255 1407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1146 1394 IPR027417 -
Pste4g00255 1407 FunFam ABC transporter B family member 20 401 648 - -
Pste4g00255 1407 FunFam ABC transporter B family member 20 70 414 - -
Pste4g00255 1407 MobiDBLite consensus disorder prediction 705 740 - -
Pste4g00255 1407 FunFam ABC transporter B family member 20 1148 1397 - -
Pste4g00255 1407 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 386 - -
Pste4g00255 1407 FunFam ABC transporter B family member 6 775 1003 - -
Pste4g00255 1407 Pfam ABC transporter 1176 1324 IPR003439 GO:0005524
Pste4g00255 1407 SUPERFAMILY ABC transporter transmembrane region 822 1143 IPR036640 GO:0005524|GO:0016020
Pste4g00255 1407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 402 645 IPR027417 -
Pste4g00255 1407 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1158 1395 IPR003439 GO:0005524
Pste4g00255 1407 CDD ABC_6TM_Pgp_ABCB1_D2_like 830 1141 - -
Pste4g00255 1407 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 378 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g00255 1407 MobiDBLite consensus disorder prediction 705 733 - -
Pste4g00255 1407 MobiDBLite consensus disorder prediction 787 811 - -
Pste4g00255 1407 MobiDBLite consensus disorder prediction 19 41 - -
Pste4g00255 1407 MobiDBLite consensus disorder prediction 666 692 - -
Pste4g00255 1407 FunFam ABC transporter B family member 6 1005 1155 - -
Pste4g00255 1407 Gene3D - 401 648 IPR027417 -
Pste4g00255 1407 Gene3D - 1148 1395 IPR027417 -
Pste4g00255 1407 MobiDBLite consensus disorder prediction 763 811 - -
Pste4g00255 1407 Gene3D ABC transporter type 1, transmembrane domain 948 1147 IPR036640 GO:0005524|GO:0016020
Pste4g00255 1407 Pfam ABC transporter 432 576 IPR003439 GO:0005524
Pste4g00255 1407 Coils Coil 257 277 - -
Pste4g00255 1407 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 411 646 IPR003439 GO:0005524
Pste4g00255 1407 MobiDBLite consensus disorder prediction 763 786 - -
Pste4g00255 1407 PANTHER ABC TRANSPORTER B FAMILY 49 647 IPR039421 -
Pste4g00255 1407 Gene3D ABC transporter type 1, transmembrane domain 70 663 IPR036640 GO:0005524|GO:0016020
Pste4g00255 1407 SMART AAA_5 438 617 IPR003593 GO:0016887
Pste4g00255 1407 SMART AAA_5 1185 1372 IPR003593 GO:0016887
Pste4g00255 1407 SUPERFAMILY ABC transporter transmembrane region 63 386 IPR036640 GO:0005524|GO:0016020
Pste4g00255 1407 Pfam ABC transporter transmembrane region 84 361 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g00255 1407 Pfam ABC transporter transmembrane region 840 1104 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pste4g00255 1407 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 835 1127 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00255 Pste-Chr4 2105253 2114706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00255 59 704 Calmodulin-binding Proteins AT2G36910 43.140 1.51e-160 516