Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00220 GGAGAAATGACAAGTGTGAAGATGGTAGGAAAATGATCTCAAACTCCAACCCTGTAGAACCAGTCACGGCGGCCGTCGCCACCGCCACCGCCACCGCCTCTTCTTCCCATGAAGATCAGCCTGCACCGCCGCCGTCACCAAACATTGTGATGTCCTCCAGGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGCTTTCTCTCTGGAAGCCGAAATGGAAGGTTCAGCTATGGATATTCTAGTTTCAAGGGTAAAAGGTCGTCAATGGAGGATTTCTTTGAGACCAAAATATCAGAGGTTGATGGTCAGACAGTTGCATTTTTTGGTGTTTTTGATGGTCATGGAGGTTCCCGAACTGCAGAGTATCTGAAAAATAATCTGTTTAAGAATTTGAGTAGCCACCCCAACTTTATCAAAGACACAAAGACTGCTATAGTTGAAGCATTTAAACAGACAGATGTTGATTATCTCAATGAGGAAAGGGGGCATCAAAGGGATGCTGGCTCCACTGCATCAACGGCTATGTTGTTGGGGGACCGGATTGTTGTTGCAAATGTTGGTGATTCCAGAGTAGTTGCGTGTAGAGCTGGTTCAGCTGTTCCTTTGTCTATCGATCACAAACCTGATAGAACTGATGAACGTCAAAGGATTGAAAAGGCTGGAGGATTCATAATTTGGGCTGGAACATGGAGAGTCGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGATGGTGTAGATTTTATTATTATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACACGGAGGCCGTGTCTATAGTACAAAATATCACAGATGCAGAAGTGGCATCCAGAGAACTTATAAAAGAAGCTTATGCTCGAGGCAGCTCAGATAACATCACTTGTGTTGTTGTTCGATTTGATCTACCCTGATGTGGCTATATGCTTTAGGTATCTGTCATCTCTAACAACTGAAAATCCAGAGCTTAGAAATCATGTATGGGCGTGAAGACGTACCGTATTTTCTTAGGAATTACTTCTATTACTTCATCTACCCTATCTTAATAGTAACATTACATTGAAAAACTAAACGAAAGTGACATTATTAGGAATATTAGTGG 1165 0.43 MISNSNPVEPVTAAVATATATASSSHEDQPAPPPSPNIVMSSRDHDSLFSGGGISFLSGSRNGRFSYGYSSFKGKRSSMEDFFETKISEVDGQTVAFFGVFDGHGGSRTAEYLKNNLFKNLSSHPNFIKDTKTAIVEAFKQTDVDYLNEERGHQRDAGSTASTAMLLGDRIVVANVGDSRVVACRAGSAVPLSIDHKPDRTDERQRIEKAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNTEAVSIVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00220 314 CDD PP2Cc 65 311 IPR001932 -
Pste4g00220 314 FunFam probable protein phosphatase 2C 59 58 313 - -
Pste4g00220 314 PANTHER PROTEIN PHOSPHATASE 40 311 IPR015655 GO:0004722|GO:0006470
Pste4g00220 314 ProSiteProfiles PPM-type phosphatase domain profile. 66 311 IPR001932 -
Pste4g00220 314 ProSitePatterns PPM-type phosphatase domain signature. 97 105 IPR000222 GO:0043169
Pste4g00220 314 SUPERFAMILY PP2C-like 59 312 IPR036457 -
Pste4g00220 314 SMART PP2C_4 55 309 IPR001932 -
Pste4g00220 314 MobiDBLite consensus disorder prediction 1 43 - -
Pste4g00220 314 Gene3D - 59 313 IPR036457 -
Pste4g00220 314 MobiDBLite consensus disorder prediction 1 28 - -
Pste4g00220 314 Pfam Protein phosphatase 2C 67 304 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00220 Pste-Chr4 1825749 1831706 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00220 38 313 PP2C-type Phosphatase Gene Family AT1G43900 73.551 4.72e-155 437