Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00219 ATGAGCGAAGACCTCAAGCGAGACTACGTCGTTTCGGAGGAGATCGGCCGGGGAAGATTCGGTACCGTTTTCCGCTGCTCCTCCGCAGACTCCGGCGACTCCTACGCCGTTAAATCAATCGACAAGGTGGCCATAACCGCCGCTGGAGACTCCCTGGATGTGCAATGTCTCTTCACGGAGCCTAAAATACTTCAGCTTCTCTCCCCTCACCCTCACATCGTAAACCTCCACGGCCTCTACGAGGACGAAACGCACCTTCACATGGTTCTCGACCTTTGCTACGAATCCGAGTTTCACCAACGGGTCATGCCCGAATCGGAAGCCGCGACGGTCATGTGGCAGCTCATGCAAGCCGTGGCGCACTGCCACCGCCTCCGTGTGGCGCACCGAGACATCAAGCCCGATAACATTCTTTTCGACGATGAGAATCGGCTGAAACTAGCCGATTTCGGCTCGGCTGAGACTTTTAATGAGGACGAGCCGATGAGCGGGGTGGTGGGGACGCCCTATTACGTGGCACCGGAGGTCCTCGCCGGAAGAGATTATAACGAGAAAGTTGACGTGTGGAGCGCCGGCGTCGTTTTGTATAAAATGTTGGCCGGGTTTCCGCCGTTTCGAGGGGATTCTCCTGTGGACATTTTTGAGGCCGTTCTTAGAGCCAATTTGAGATTTCCCACTCGTGTTTTTTGCTCTGTCTCTCACGCGGCTAAAGATCTGCTTCGGAGAATGCTGTGCAGAGACGTTTCTAGAAGGTTCTCAGCAGAACAGGGCACCCATGGTTTAGCATTCTTGAACAGAGTGAGTGCTGAGTGCGCACGTGGAGGTGATTTCTCTTCTCTGTATATGCCGCTGCACCCTATGCCTTTTCAGACAGAGATGAATTTTATATTCTCTGATTAAGGCCTCTTTTTTCCCTTTCGCTTGAGGATTCAGCAATATAGAGTACGCAGCCCAAGTATGCCAAGAAACACGATCTAGGGGTCCTTCTTTTCTTTGTTTCATTTTTAGTGTATGTTTTGAAATAATTTGCAGTTTCGCCACTCCAGTGAGAGTACAGAATGTTTTATCTACAAGTATGTAATTTGAATATTCTCTTTCCATGGATCTAAGAGGAAAATACAATTGAATATTTGAAGC 1137 0.4987 MSEDLKRDYVVSEEIGRGRFGTVFRCSSADSGDSYAVKSIDKVAITAAGDSLDVQCLFTEPKILQLLSPHPHIVNLHGLYEDETHLHMVLDLCYESEFHQRVMPESEAATVMWQLMQAVAHCHRLRVAHRDIKPDNILFDDENRLKLADFGSAETFNEDEPMSGVVGTPYYVAPEVLAGRDYNEKVDVWSAGVVLYKMLAGFPPFRGDSPVDIFEAVLRANLRFPTRVFCSVSHAAKDLLRRMLCRDVSRRFSAEQGTHGLAFLNRVSAECARGGDFSSLYMPLHPMPFQTEMNFIFSD 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00219 299 Gene3D Phosphorylase Kinase; domain 1 1 92 - -
Pste4g00219 299 Gene3D Transferase(Phosphotransferase) domain 1 93 272 - -
Pste4g00219 299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Pste4g00219 299 CDD STKc_CAMK 8 256 - -
Pste4g00219 299 SUPERFAMILY Protein kinase-like (PK-like) 5 260 IPR011009 -
Pste4g00219 299 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 257 - -
Pste4g00219 299 SMART serkin_6 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00219 299 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pste4g00219 299 ProSiteProfiles Protein kinase domain profile. 9 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00219 299 FunFam Maternal embryonic leucine zipper kinase 2 262 - -
Pste4g00219 299 Pfam Protein kinase domain 9 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00219 Pste-Chr4 1823169 1824403 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00219 3 256 EF-hand Containing Proteins AT1G50700 40.076 4.86e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pste4g00219 Pkinase 2.2e-67 CL0016