LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste4g00208	GAACACGTACACTCACTTTCACTTCCTCAAGGTTACGTTTTCTTATGTGCTTCCTTGCACGTTCAAACGTGCATGATATTTCTTTCTTCTCTTTTGAGTCACCACCGATCCAGGTTGGGAGAGTGGAGTAAGGAAGAGAGTTGTGATAAAAGATACAGTGAGATGGCTAAGGATGAGTTGCAAGTGCTTAATGCACTGGATGTGGCAAAGACACAATGGTACCATTTCACTGCAATTGTGATTGCTGGAATGGGTTTCTTCACTGATGCATATGATCTGTTTTGCATCTCCCTTGTCACCAAATTGCTTGGTCGCATATACTACACTGAAGGCCATGACAAGCCGGGCTCTCTGCCATCAAATGTTTCTGCTGCCATCAATGGGGTTGCATTCTGTGGAACACTTGCAGGCCAGCTTTTCTTTGGCTGGCTTGGTGACAAAATGGGAAGGAAGCGTGTATACGGGATGACTCTTATGCTCATGGTCATATGCTCAATTGCTTCTGGTCTTTCCTTTGGCAAAGACCCTAAAGCTGTTATGGCCACCCTTTGCTTCTTCCGTTTCTGGCTTGGCTTTGGCATCGGTGGAGACTACCCTCTTTCGGCCACTATCATGTCTGAGTATGCCAACAAGAAGACTCGTGGAGCATTCATAGCTGCCGTTTTTGCCATGCAAGGTTTTGGAATTTTGGCTGGTGGCATGATTGCAATAATAGTTTCATCTGCTTTCAAGGCCTTGTACCCTGCTCCAGTATTCCAGGTTAACCCAGTTTTGTCCACAGTCCCACAAGCAGATTACGTTTGGAGGATAATCTTGATGTTTGGTGCACTCCCAGCTCTGCTCACATACTACTGGCGTATGAAAATGCCTGAAACTGCAAGATACACTGCCTTGGTTGCCAAGAATGCCAAGCAGGCAGCTACAGATATGTCAAAGGTGCTGCAAGTTGAGATAGAAGCTGAAACAGACAAAGTTCAGCAATTAGACACAAAAAGAGGGAATGAATTTGGCCTGTTCTCAATACAGTTCCTTCGCCGCCACGGACTTCACCTTGTTGGAACAGCCTCTACTTGGTTCCTGTTGGACATTGCCTATTATAGTCAGAATCTTTTCCAGAAAGACATTTTCAGTACAATTGGTTGGATACCTGAAGCAAAAACCATGAATTCCATTGAAGAGGTTTATAAAATTGCTAGAGCACAGACCCTCATAGCCCTTTGCAGTACTGTCCCTGGTTACTGGTTCACAGTGGCACTCATTGATAAGATTGGGAGGTTTACAATTCAGTTGATGGGGTTTTTCTTTATGACTGTCTTCATGTTTGCCTTAGCCATTCCATACCACCACTGGACCATGAAGGGCAACCAAATTGGGTTTGTTGTTTTGTATTCACTGACATTCTTCTTTGCCAATTTTGGTCCAAATGCCACCACATTTGTGGTGCCAGCAGAGATTTTCCCTGCAAGGCTAAGGTCAACATGCCATGGCATATCAGCTGCAGCTGGGAAAGCTGGGGCAATGGTAGGGGCTTTTGGCTTCCTGTATGCTCAAAATGGCTTTGGACTGAGAAATACACTTATTGTTCTGGGTGTGATTAACTTCTTGGGTTTGCTGTTTACATTCTTGGTTCCTGAATCCAAAGGAAAATCCCTTGAGGAGATGTCTGGTGAAGCTGAAGAAGAGATTGCTACTGCAATAGAATCAGCGATCTGA	1713	0.4472	EHVHSLSLPQGYVFLCASLHVQTCMIFLSSLLSHHRSRLGEWSKEESCDKRYSEMAKDELQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTEGHDKPGSLPSNVSAAINGVAFCGTLAGQLFFGWLGDKMGRKRVYGMTLMLMVICSIASGLSFGKDPKAVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGMIAIIVSSAFKALYPAPVFQVNPVLSTVPQADYVWRIILMFGALPALLTYYWRMKMPETARYTALVAKNAKQAATDMSKVLQVEIEAETDKVQQLDTKRGNEFGLFSIQFLRRHGLHLVGTASTWFLLDIAYYSQNLFQKDIFSTIGWIPEAKTMNSIEEVYKIARAQTLIALCSTVPGYWFTVALIDKIGRFTIQLMGFFFMTVFMFALAIPYHHWTMKGNQIGFVVLYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAMVGAFGFLYAQNGFGLRNTLIVLGVINFLGLLFTFLVPESKGKSLEEMSGEAEEEIATAIESAI	570

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste4g00208	570	SUPERFAMILY	MFS general substrate transporter	64	555	IPR036259	-
	Pste4g00208	570	CDD	MFS_PhT	79	547	-	-
	Pste4g00208	570	Gene3D	MFS general substrate transporter like domains	74	320	IPR036259	-
	Pste4g00208	570	Gene3D	MFS general substrate transporter like domains	324	569	IPR036259	-
	Pste4g00208	570	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	74	551	-	-
	Pste4g00208	570	Pfam	Sugar (and other) transporter	79	555	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Pste4g00208	570	NCBIfam	phosphate:H+ symporter	65	557	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Pste4g00208	570	FunFam	Inorganic phosphate transporter 1-6	74	568	-	-
	Pste4g00208	570	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	78	548	IPR020846	GO:0022857

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste4g00208	Pste-Chr4	1707633	1709919	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste4g00208	55	556	Inorganic Solute Cotransporters	AT2G38940	79.651	0.0	855