Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00207 ATGTCATCTCGCATTCTTGCCGACAATTCGCTACCGCTCACCGATCTCACTGCAACGCGCCGCCCCGATATGCCCACTCTCGGCCAGCTCCTCAAGCACGTCGGTGACGCTCACAAGGATGCAGCCGCCGACGGAAGCCACACGCCGGTGCACCACGCCCTCGACATCGCCGACTCCTCAGCTCGCTCCCTCCCTTTCGTTCTATCCTTCACCAACCTCACCTACAGCGTCAAGGTGCGCCGCAAAATGAACCTCTCCTCCATCTTCTCCGCCCGCAGCAGCCGCCTCGGTGCGGTGGCTGAGGCGCCCGCGGTCAGTGAGAGCATGTTCTCGCGGACGAAGACGCTGCTCAACGACATCTCCGGCGAGGCACGCGACGGCGAGATCATGGCCGTCCTTGGAGCCAGCGGTTCCGGAAAGTCAACCCTAATCGATGCACTGGCGAACCGAATCGCGAAGGGAAGCCTAAAGGGCGCGGTGGCGTTGAACGGCGAAGCGCTGGAGTCGCGTCTTCTGAAGGTGATTTCGGCGTACGTGATGCAAGACGACCTTCTCTTCCCAATGCTGACGGTGGAAGAGACTCTGATGTTTGCGGCGGAGTTCCGACTACCGCGCACACTGTCCAAGTCAAAGAAAAACGCACGCGTCCAGGCTCTCATCGACCAGCTAGGGCTCCGGAACGCGGCGAAAACGGTGATAGGGGACGAAGGGCACCGGGGAGTGTCGGGCGGAGAGCGGCGGAGAGTGTCGATAGGGATCGACATAATCCACGACCCGATACTGCTGTTCCTGGACGAGCCAACGTCGGGACTGGACTCGACGAGCGCGTTCATGGTGGTGAAGGTGCTGCAGAGAATTGCGCAGAGCGGGAGCATCGTGATCATGTCGGTGCACCAACCGAGTTACAGAATAGTAGGGCTTCTGGACCGCATGATCTTCCTGTCGCGGGGGCAGACAGTATACAGCGGTCCGCCGTGGCAGTTAGCGGTTTTCTTCTCGGAGTTCGGTCATCCGATTCCGGAAAGCGATAACAGAACGGAGTTCGCGTTGGATCTGATTAGGGAACTGGAAGGCTCCAGCGGGGGAACGAAGAGTCTGGTGGAGTTGAACAAGAGGTGGCAGAGCAGGAGGAATGAGGAGGTGGCGAGGAGGGGAAACGGGGTGTCGTTGAAGTTGAAGGAAGCAATAAGCGCAAGCATATCGAGAGGAAAACTGGTGTCAGGGGCGAGCAACATGAACAGGAACGCGTCCTCGATGGTGCCAACATTTGCTAATCCGTTTTGGGTTGAGATAGCGACGCTGTGGAAACGGTCGTTTATGAACTCGAGAAGAATGCCGGAGTTGCTGGGGATAAGATTGGGTGCTGTGATGGTGACGGGGTTTATACTGGCGACCATGTTTTGGCAGCTTGATAACTCTCCCAAAGGAGTTCAAGAGAGGCTTGGATTCTTCGCCTTTGCTATGTCAACCACTTTTTACACCACGGCGGACGCTCTTCCTGTGTTCCTTCAAGAACGCTACATTTTCATGAGGGAAACTGCCTACAACGCATATCGGAGGTTGTCTTATGTGGTGTCCCATGCCCTTGTTGCTTTCCCCTCGCTGGCTTTTCTTTCTCTTGCTTTCGCTGCTACCACTTTCTGGGCTGTAGGGCTGGACGGTGGCTTTTTCTTTTACTTTCTCATGATATTTGCTTCCTTTTGGGCTGGGAACTCGTTCGTGACTTTCCTTTCCGGTGTTGTGCCCCACGTTATGTTGGGTTACACCATTGTGGTTGCCATTCTCGCCTACTTCTTGCTTTTCAGTGGCTTCTTCATTAACAGGGACAGGATTCCCAGTTACTGGATATGGTTCCACTACCTTTCTTTGGTGAAATACCCATACGAAGGTGTTTTGCAGAATGAGTTCGATGACCCCGTCAAGTGCTTTGTTAGGGGTGTCCAGATATTCGATAACACCCCACTTGGGTCCGTCCCCGATTCTCTCAAGTTGAAGCTGTTGGACACCATGAGCAGCACCCTCGGTATCAACATCACCAGCTCCACTTGTTTGACCACCGCTGCTGATATATTGCACCAGAATGGGGTCTCCGATTTGTCCAAGTGGAACTGCCTCTGTATCACTGTTGCATGGGGATTCTTCTTCCGCTTCCTCTTCTACTTCTCTCTCTTGCTCGGCAGCAAGAACAAGAGGACCTAA 2199 0.5489 MSSRILADNSLPLTDLTATRRPDMPTLGQLLKHVGDAHKDAAADGSHTPVHHALDIADSSARSLPFVLSFTNLTYSVKVRRKMNLSSIFSARSSRLGAVAEAPAVSESMFSRTKTLLNDISGEARDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGAVALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKNARVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLQRIAQSGSIVIMSVHQPSYRIVGLLDRMIFLSRGQTVYSGPPWQLAVFFSEFGHPIPESDNRTEFALDLIRELEGSSGGTKSLVELNKRWQSRRNEEVARRGNGVSLKLKEAISASISRGKLVSGASNMNRNASSMVPTFANPFWVEIATLWKRSFMNSRRMPELLGIRLGAVMVTGFILATMFWQLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAYNAYRRLSYVVSHALVAFPSLAFLSLAFAATTFWAVGLDGGFFFYFLMIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPYEGVLQNEFDDPVKCFVRGVQIFDNTPLGSVPDSLKLKLLDTMSSTLGINITSSTCLTTAADILHQNGVSDLSKWNCLCITVAWGFFFRFLFYFSLLLGSKNKRT 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00207 732 SMART AAA_5 126 325 IPR003593 GO:0016887
Pste4g00207 732 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 100 341 IPR003439 GO:0005524
Pste4g00207 732 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 52 718 - -
Pste4g00207 732 Pfam ABC transporter 117 269 IPR003439 GO:0005524
Pste4g00207 732 ProSitePatterns ABC transporters family signature. 241 255 IPR017871 GO:0005524|GO:0016887
Pste4g00207 732 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 329 IPR027417 -
Pste4g00207 732 Gene3D - 105 332 IPR027417 -
Pste4g00207 732 FunFam ABC transporter G family member 6 106 332 - -
Pste4g00207 732 Pfam ABC-2 type transporter 431 636 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00207 Pste-Chr4 1696659 1698857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00207 116 301 Calmodulin-binding Proteins AT2G36910 30.688 8.93e-12 67.0