Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00191 TGAAAAATAAGGCCAATAGATTGGTGCATACATACTAGTGGAGGATATTGTCACTGTCATGATTAAGCAATTGGCTTGTTTAGTTAGGCACAAAAGAGAGCAAGTGAGGAGGAGGAATGATGTTGTAACAACTATGCAGATTCAAACGGCGTCATCTTCCTATCTACGTTTATGTCTTTCAGTTGAATAGATTCCCAGTTCCCTTCTATTCCTGGGACCTCATCGCACTCACAGAGCCCCCACTTTATTCTTTTCTCACTGTCACTCTCTTCATTCTATTCTATTCTATTCTAACGCGTCCGAATATGTTCTTCACTTTCCATTTTTCAACGCCCTCCACTCCTTTTTTAACCTCTTCTTCTGCCAAAACTCAAAGGCTCTTCTCTTCTTATTTGAATTTGACTTAAAGCTACTTCTCTCTTTATTCTCCTTATTATTTTCAACATCACACAGCCACTGCCAATATATAGACAACACCAAACTGCTGTTATTATCTTGGATACCAACCTCTTTTCCTTTCACTTTGTTGTTTGTTTCTTATTACTTAACTTGACTTTTGAAACCTCAGGCTTGGAATGGACCGTGTGGTTCTTGACAGTATCATCAATAGGCTGCTCGAAGTCAGAGGCAGACCCGGGAAACAGGTACAACTTTCTGAGGCTGAGATCAAGCAGCTTTGTCTTGTCTCCAGGGATATCTTCATGAACCAGCCAAACCTCTTGGAACTGGAGGCACCAATTAAGATCTGTGGAGATGTCCATGGTCAATATTCTGATCTTCTGCGACTTTTTGAGTATGGTGGATTGCCTCCTCGTTCTAATTACTTATTTTTAGGGGACTATGTTGATCGTGGGAAGCAAAGTTTGGAGACTATATGTCTCCTTCTGGCTTATAAAATAAAATATCCTAGAAACTTTTTCCTTCTGAGGGGTAACCATGAATGTGAATCTATAAATCGCATCTATGGATTTTATGATGAGTGTAAACGAAGATACAATGTGAGGCTTTGGAAAGTGTTCACAGAGTGTTTCAATTGCTTGCCAGTAGCTGCTCTAATTGATCAAAAGATAATCTGTATGCATGGTGGACTCTCTCCTGAGTTACACAACTTAAATCAGATAAAGACTTTGCCACGTCCTACTAAAGTACCTGAAACTGGTCTAGTATGTGACCTCCTTTGGTCTGATCCTAGTAGTGACATTCGGGGTTGGGGAGAAAACGAACGTGGAGTGTCCTATACTTTTGGTGCTGACAGGGTAACAGAATTCCTTCAAAAGCATGATCTTGATTTGATTTGCCGGGCACACCAGGTTGTGGAAGACGGGTATGAATTCTTTGCTAATAGACAACTTGTAACTATCTTCTCGGCACCTAATTACTGTGGAGAGTTTGACAATGCCGGTGCTATGATGACTGTTGATGAGACACTTGTGTGCTCTTTTCAAATATTGAAGCCTGTAGATAAAAAATCTAATAATAAGTTTGGCTTTGGGAGCACAACTACTGTTAAGCATAGTACTCCAACAAAAGCCAAGCAATCATTTTTTGGTGCTAAAGCATGAGCTGATGAAGGTGACTACAATCAGTAAATGTTTGGTACATGGCCAAAGTTGAATTGGATGAGACGTTATCCGTGTTCACTTCAGTGCAAAGGAACAATACTAGTACAGATAACCCAAGAGCTATGAAGAATGCTGGATATTATCTTCGCTTTATTGTTTAGGGATAGCTGAATGCTTCTTTCTTCTGCAGGCACAGTTGCCCCTTGTACGATATTGTCAAACACAAATGGAGGACTGAGGTGTAACTTTTCTTCTCCTTCAGTCCTCTTATATCCTCTTTGAGATCTCCCGTTTATTGCAGCATTCCTTTGAATAACATTTGGAAGTTATTTCACCAGTGCGCTTGATTGGTTAGACTATATGTTCTACACACCTTGCATAGGTCAATTTTTTATCTTGAATTTTTTCTTTATTATATGAGATGAGAATAATAAGAGAAGAAATTATAAGACTGGCTAAATGGCA 2027 0.3947 MDRVVLDSIINRLLEVRGRPGKQVQLSEAEIKQLCLVSRDIFMNQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPRNFFLLRGNHECESINRIYGFYDECKRRYNVRLWKVFTECFNCLPVAALIDQKIICMHGGLSPELHNLNQIKTLPRPTKVPETGLVCDLLWSDPSSDIRGWGENERGVSYTFGADRVTEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMTVDETLVCSFQILKPVDKKSNNKFGFGSTTTVKHSTPTKAKQSFFGAKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00191 328 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Pste4g00191 328 FunFam Serine/threonine-protein phosphatase 1 303 - -
Pste4g00191 328 SUPERFAMILY Metallo-dependent phosphatases 17 297 IPR029052 -
Pste4g00191 328 Gene3D - 1 305 IPR029052 -
Pste4g00191 328 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Pste4g00191 328 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Pste4g00191 328 SMART pp2a_7 26 296 IPR006186 GO:0016787
Pste4g00191 328 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Pste4g00191 328 CDD MPP_PP1_PPKL 5 294 - -
Pste4g00191 328 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 9 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00191 Pste-Chr4 1606295 1610494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00191 33 237 Calmodulin-binding Proteins AT5G63870 32.520 9.64e-29 110
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03348 5 26722550 26727578 Pste4g00191 4 1606295 1610494 ECH
Pste4g00191 4 1606295 1610494 Pste4g00191 4 1606295 1610494 ECH