Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00158 AGTCTTTGCATTAGAAAATGAGACCGATCATTTGACACTAATGAAGTTTAAAGAATCCGTATCTACTGATCCGCATGGAATCTTGTTCACTTGGAATACTTCTACTCACTTTTGTAACTGGCATGGAGTTACATGCAATCCCTTACTTCAAAGAGTTATGGGGTTAAACTTGCAAGGATACAAATTGAAGGGATCCATATCTTCTCACGTTGGCAATCTCTCTTTTTTGAGAAACCTCAACCTTGGAGACAATGAATTCTATGGCGAAATCCCACAAGAATTGGGACAATTGTCACAATTGCAAAACCTTTCTCTCAAAAATAACTTATTGACAGGAAAAATTCCTATAAATTTAACAGGTTGCACTGACTTGAAAATCTTGTACTTGCATAGGAACAATCTCAATGGCAACATACCAATCAAATTTGGCTCACTTAAAAAACTTCAACATTTTGTCACTTTTGAAAACAAGTTAACCGGAGAAATCCCTTCATCCATAGGTAATCTTTCATCCCTTACTCTTCTTAGTGTTGGTGGTAACAACTTAGAGGGACATATTCCAGAAGAAATATGTCTTCTAAAGAAAATGACATTTGCATCATTGGGTCAAAACAAATTGGCTGGAGCATTTCCTTCTTGTACTTATAATATGTCATCTCTTAGAATGATCTCAGCTACACAAAATCAATTAAATGGCTCTCTTTCACCTAACATGTTCAATACCCTCCCCAATCTCCAAGAACTTTATATTGCTGACAATAAAATCTCCGGTTCAATCCCTCCTTCCATTACAAATGCATCCATGTACTTTTTAGCACTTGAACTCAGTCGAAACAATTTCACAGGACACATTCCCAACATGGGAAAGCTAAAATATCTTGATATCATATCTCTGTCCTGGAACAATCTAGGTGAAAATTCAACTAATGATTTGAATTTTATAGAATCATTGACAAATTGTAGTAAGTTGCAGCTGTTATCTATATCCTACAATAATTTTGGAGGTCATTTGCCAAATTCCTTAGGCAACTTATCCACTCAACTTAGTCAACTATATCTTGGAGGTAATCAGATATTGGGAGAAATTCCTACAACAATAGGGAATCTAATTGGCTTAACTCTCTTAACAATGGAAGAAAATCTCATTGGTGGAAATATTCCAACAACTTTTGGGAAGCTTCACAAAATGAAAAAGCTAAATTTGGGTGCAAACAAGTTGTCGGGAGAGATTAAATCCTACATAGGAAACCTTAGTGAATTGTTTCATTCAGAATTAGAGGAAAATTCATTGGAAGGAAATATTCCTTCAAGTGTAAGGAACTGCCAGAAATTACAATACTTAGACTTTTCACATAATAACCTTACAGGGATCATACCCTTTGAGGTTTTTATGCTTGCTTCTCTAACAATCTTGTTGGATTTGTCCCACAACTCATTGAGTGGTAGTATACCGAAAGAAGTGAGAAACCTAAAAAATCTTAATTTGCTAGATGTGTCTGAGAATCGTATGTCTGACCTCTCACGAAATGACTTATCTGGAACAATTCCTGATGTTTTGCAGAAACTTACACTTTTACAATATTTCAATATATCATTTAACAAGTTGGTTGGTGATGTGCCAAGTGAAGGTATCTTTCAAAATGCAAGTGGGTTCATTTTTACTGGAAATAGTGAGCTTTGTGGCGGAGTTTCAAAACTAAATCTACCGCCATGCCCTATTAAAGGTAAAAAAATTGGAAAACACACATCCAAGTTAATAGCTGTGATAATCAGTGTGATTCTTGCTCTTTTTGCACTGTCATTTATTCTAACTATCTATTGCATGAGGAAAAAAAGTAAGAAACCATCTTTTTTGGTTTCACCAACAATTGACCACCAACCAACTCCTCAAGTTTCATACCATAGCCTACACATCAGCACTGATGGCTTCTCATCTACAAACTTGATTGGGTCTGGAAATTTTAGTTTTGTTTACCAAGGAACTCTTGAGTCTGAAAACAAAGTTGTTGCCGTAAAGGTCCTAAATCTTCATAAAAAGGGAGCTCACAAGAGTTTTATTACTGAATGCAATGCACTTAAAAATATTAAACATCGAAATTTGTACATGAGAAATGGAAGCTTAGAGCAATGGTTGCATCCTGTGACACTAAATGGAGAGCATCCAAGAACATTGAACCTTGATCAAAGATTAAATATCATGATTGATGTTGCCTCTGCATTGCATTATCTTCATCATGAATGTAAGCAATCCATCATTCATTGTGATTTAAAGCCAAACAATGTCCTTCTCGATGATGACATGATTGCTCATGTGAGTGATTTTGGCATCGCAAGACTTCTCTCTACCATTAATGGTACGACTTCTAAACACACAAGTACAATTGGAATAAAAGGGATTGTTGGTTATATTCCTCCAGAATATGCTATGGATTTTAAGGTCTCAACTTGTGGCGATGTATATAGCTTTAGAATTCTTATGTTGGAAATGCTTACCGGAAGAAGACCCATAGATGAAATGTTTAAAGATGGTAAAAAACTTCATAACTTTGTTGCAATTTCATTTCCTGATAATGTTTTGCAAATTTTGGATGCCCAACTTATTCAAACAGATGAAGCAATAACGTTGAAAGAAAATCATTGGAATTTTAGTCCAAATAATGAGAAATGCATACTGTCACTTTTTAAGATTGGACTCACTTGTTCTATTGAATCAACAAAAGAAAGAATAAATATGGTTTACGTCACTAGGGAGCTAAATCGAATTAAGGAGTCCTTTTATATTGGTGAG 2788 0.3504 MKFKESVSTDPHGILFTWNTSTHFCNWHGVTCNPLLQRVMGLNLQGYKLKGSISSHVGNLSFLRNLNLGDNEFYGEIPQELGQLSQLQNLSLKNNLLTGKIPINLTGCTDLKILYLHRNNLNGNIPIKFGSLKKLQHFVTFENKLTGEIPSSIGNLSSLTLLSVGGNNLEGHIPEEICLLKKMTFASLGQNKLAGAFPSCTYNMSSLRMISATQNQLNGSLSPNMFNTLPNLQELYIADNKISGSIPPSITNASMYFLALELSRNNFTGHIPNMGKLKYLDIISLSWNNLGENSTNDLNFIESLTNCSKLQLLSISYNNFGGHLPNSLGNLSTQLSQLYLGGNQILGEIPTTIGNLIGLTLLTMEENLIGGNIPTTFGKLHKMKKLNLGANKLSGEIKSYIGNLSELFHSELEENSLEGNIPSSVRNCQKLQYLDFSHNNLTGIIPFEVFMLASLTILLDLSHNSLSGSIPKEVRNLKNLNLLDVSENRMSDLSRNDLSGTIPDVLQKLTLLQYFNISFNKLVGDVPSEGIFQNASGFIFTGNSELCGGVSKLNLPPCPIKGKKIGKHTSKLIAVIISVILALFALSFILTIYCMRKKSKKPSFLVSPTIDHQPTPQVSYHSLHISTDGFSSTNLIGSGNFSFVYQGTLESENKVVAVKVLNLHKKGAHKSFITECNALKNIKHRNLYMRNGSLEQWLHPVTLNGEHPRTLNLDQRLNIMIDVASALHYLHHECKQSIIHCDLKPNNVLLDDDMIAHVSDFGIARLLSTINGTTSKHTSTIGIKGIVGYIPPEYAMDFKVSTCGDVYSFRILMLEMLTGRRPIDEMFKDGKKLHNFVAISFPDNVLQILDAQLIQTDEAITLKENHWNFSPNNEKCILSLFKIGLTCSIESTKERINMVYVTRELNRIKESFYIGE 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00158 916 Gene3D Ribonuclease Inhibitor 108 182 IPR032675 -
Pste4g00158 916 Gene3D Ribonuclease Inhibitor 1 107 IPR032675 -
Pste4g00158 916 SUPERFAMILY Protein kinase-like (PK-like) 609 905 IPR011009 -
Pste4g00158 916 SMART LRR_typ_2 60 84 IPR003591 -
Pste4g00158 916 SMART LRR_typ_2 156 180 IPR003591 -
Pste4g00158 916 SMART LRR_typ_2 477 500 IPR003591 -
Pste4g00158 916 SMART LRR_typ_2 509 534 IPR003591 -
Pste4g00158 916 SMART LRR_typ_2 380 404 IPR003591 -
Pste4g00158 916 SMART LRR_typ_2 229 253 IPR003591 -
Pste4g00158 916 SMART LRR_sd22_2 84 107 - -
Pste4g00158 916 SMART LRR_sd22_2 332 358 - -
Pste4g00158 916 SMART LRR_sd22_2 229 255 - -
Pste4g00158 916 SMART LRR_sd22_2 428 449 - -
Pste4g00158 916 SMART LRR_sd22_2 380 406 - -
Pste4g00158 916 Gene3D Transferase(Phosphotransferase) domain 1 693 913 - -
Pste4g00158 916 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 303 492 - -
Pste4g00158 916 Gene3D Phosphorylase Kinase; domain 1 610 692 - -
Pste4g00158 916 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 689 915 - -
Pste4g00158 916 ProSitePatterns Protein kinases ATP-binding region signature. 636 659 IPR017441 GO:0005524
Pste4g00158 916 Pfam Protein kinase domain 632 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00158 916 ProSiteProfiles Leucine-rich repeat profile. 430 451 IPR001611 GO:0005515
Pste4g00158 916 SUPERFAMILY L domain-like 260 548 - -
Pste4g00158 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 738 750 IPR008271 GO:0004672|GO:0006468
Pste4g00158 916 Gene3D Ribonuclease Inhibitor 183 559 IPR032675 -
Pste4g00158 916 Pfam Leucine rich repeat N-terminal domain 1 33 IPR013210 -
Pste4g00158 916 ProSiteProfiles Protein kinase domain profile. 630 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00158 916 PANTHER OS04G0122200 PROTEIN 492 910 - -
Pste4g00158 916 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 33 228 - -
Pste4g00158 916 SUPERFAMILY L domain-like 10 290 - -
Pste4g00158 916 SMART serkin_6 630 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00158 Pste-Chr4 1380166 1383317 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00158 1 913 Receptor kinase-like Gene Family AT3G47570 39.837 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Pste4g00158 Pkinase 2.4e-28 CL0016