Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00157 AGGGTCTTCTTGCCTCCCGCTATAACTTTCCCTTTTCCCTGTTAATCTGCTCCCACTTTGCTCAGACATCAAACCCTAACCCTAATCTTCATTCTTCAATTTAAACTTCACATTTCCATTGTTTATGTGACATATTCCGAAATAATTGTCCCTCTTCGTTTCAATTTCCTCCCATTTCGAAGTTGCATCATCGTGTAAGTGCTCGCGATTTCAGGCATGAATCGTGTATCGGTATTCCGGTAGAGCATATGACGAAGGGAGTTATCCGAACTGCGAACCGATTGCATGGGTTTAGAGAATGCCGGAGCTTCGTAGCGGCGTGAGACGTGGCCGTGGGCGTGGCCAGAAGGGATCGGAACCGGCAAAGAAGGAGGTGAAGGCTCGTGCGGCACCAAGGGGAAGGCCGAGAACTAGATTGGCGGCGAAGGAGTTGGAGCACCAGGAGCCGTTGATCCCAATACCGGAGCCGTTGATACCAGAGCCAGCAAAGGAAGAGAAAAAGGAAGTGGGCGTCATGGGTGATGAAAGTGGTGGGTTGAGTGGTAATAAGGCTGAGGATGATGCCATTGCTCCACCTTTTCCTGATAGGGTTCAAGTGGGTGGATCGCCTATGTACAGGGTAGAGAGGAAACTAGGTAAAGGTGGATTTGGTCAGGTTTTTGTGGGCCGTCGGGAGCGTGCAACTGGTGCTGGAGCTATGGAGGTGGCTCTGAAATTTGAACATAGAAACAGTAAGGGCTGTAACTATGGCCCACCTTATGAGTGGCAAGTATACAACACTCTTGGGGGTAGTTATGGAATACCTAAAGTACACTATAAAGGAAGACAAGGAGAATATTATATAATGGTTATGGACATACTTGGTCCAAGCTTGTGGGACCTTTGGAATTCCTCAAGCCAGACGATGTCTGCTGAAATGGTCTCATGTATAGCAGTCGAGTCCTTATCTATACTTGAGAAGATGCACTCAAAAGGGTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTTGGTCAGCCAGCTACAGCACAAGAGAAGAAACTGTTCCTGGTTGACCTTGGATTGGCAACAAAATGGAGAGACACCTCCAGTGGACTCCATGTTGACTATGATCAACGTCCTGATATGTTTAGAGGAACTGTTCGATATGCTAGTGTCCATGCTCATTTGGGGAGAACTGCTAGTAGAAGGGATGATCTTGAATCTCTTGCATACACATTAGTCTTCCTTCACAAGGGCCGATTACCATGGCAAGGTTATCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAGACACTGTGCTGCATGTGTCCTCCCCCTTTTAGGCAATTTCTTGAGATTGTAGTGAATATGAAATTTGATGAAGAGCCTAATTATTGCAAGCTAATATCTTTGTTTGATGGTACAATTGGACCCAATCCAGCATTGCGGCCTATTAATACTGAAGGTGCCCAAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAAGATGATTCCCAGCCTAGAAAGAAAGTTCGTTTAGGAGTTCCTGCTACACAATGGATCTCAATTTACAATGCAAGGCTGCCAATGAAGCAAAGGTATCATTACAATGTGTCTGATGCGAGATTAGAACAGCATGTAGAGAGAGGGATTGCTGATGGCCTTCTCATTAGTTGTGTGTCTTCTTGTTGCAATCTTTGGGCCCTTATTATGGATGCTGGAACTGGATTTACAGCTCAAGTTTACAAGTTGTCAACTTTTTTCTTGCATAAGGAATGGATCATGGAGCAGTGGGATAAAAACTTCTACATTACTTCTATTGCAGGGACCAACAATGGCAGCTCTCTTGTAGTGATGTCAAAAGGTACACAGTATACACAACAATCCTACAAAGTTAGTGAATCTTTCCCCTTCAAATGGATAAATAAGAAGTGGAGAGAAGGTTTTCATGTCACCTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGGAATGCCGGATTCAGTAAACAGGTGGTTGAACTCGATTTTCTCTATCCAAGTGAGGGCATCCATAAACGTTGGGATAAAGGTTATAGGATTACAGCAACCGCTGCTACATTGGATCAATCTGCTCTTATATTAAGTATTCCAAGGCGCAAGCTCAGTGATGAAACTCAGGAAACTCTACGGACATCACAATTTCCCAGCTCACATGTCAAGGAAAAATGGGCAAAAAACCTTTACCTTGCCTGTTTGTGCTATGGGCGCACAGTATGCTGATTTCCATATGTTAAAAAGCATTTTATTGACAAGCGGATTGAGTTATCAACTGCCCAACCACACAAGATCTTTTTTGTAGAAGGATACTAATTGTTGTGCCAGCAGAGAACTATATTTTGTTGTGTTATATGAATATTATTCTGTCCCTCCCCTTCTATTATATGCTTTACTTGGCTAGGGAATGTTGCAAAAAGCTGAGTAATGCATGGTGTTTAATATGTCCCTTCTTTATGTATTTGCAGTTTTTTATTCCTGAATGGGAGGGTATTTTTAGTGCACACAATTAGAATTGGATTGGGTAATGGATTCAGGAGTTTCAAACTCAATCAAACATGACTACATAACAAATATATAATAAAATTAGTATGTG 2654 0.4307 MPELRSGVRRGRGRGQKGSEPAKKEVKARAAPRGRPRTRLAAKELEHQEPLIPIPEPLIPEPAKEEKKEVGVMGDESGGLSGNKAEDDAIAPPFPDRVQVGGSPMYRVERKLGKGGFGQVFVGRRERATGAGAMEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYIMVMDILGPSLWDLWNSSSQTMSAEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATAQEKKLFLVDLGLATKWRDTSSGLHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPETLCCMCPPPFRQFLEIVVNMKFDEEPNYCKLISLFDGTIGPNPALRPINTEGAQKVGQKRGRLNIEDDSQPRKKVRLGVPATQWISIYNARLPMKQRYHYNVSDARLEQHVERGIADGLLISCVSSCCNLWALIMDAGTGFTAQVYKLSTFFLHKEWIMEQWDKNFYITSIAGTNNGSSLVVMSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNAGFSKQVVELDFLYPSEGIHKRWDKGYRITATAATLDQSALILSIPRRKLSDETQETLRTSQFPSSHVKEKWAKNLYLACLCYGRTVC 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00157 661 FunFam casein kinase 1-like protein HD16 80 417 - -
Pste4g00157 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pste4g00157 661 SMART serkin_6 106 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00157 661 PANTHER CASEIN KINASE-RELATED 104 624 - -
Pste4g00157 661 SUPERFAMILY Protein kinase-like (PK-like) 106 382 IPR011009 -
Pste4g00157 661 ProSiteProfiles Protein kinase domain profile. 106 386 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00157 661 Pfam Protein kinase domain 106 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00157 661 MobiDBLite consensus disorder prediction 82 101 - -
Pste4g00157 661 CDD STKc_CK1 105 376 - -
Pste4g00157 661 MobiDBLite consensus disorder prediction 1 50 - -
Pste4g00157 661 ProSitePatterns Protein kinases ATP-binding region signature. 112 139 IPR017441 GO:0005524
Pste4g00157 661 MobiDBLite consensus disorder prediction 1 60 - -
Pste4g00157 661 Gene3D Transferase(Phosphotransferase) domain 1 85 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00157 Pste-Chr4 1375199 1381743 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00157 76 334 AGC Kinase Gene Family AT3G08730 23.485 2.14e-09 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pste4g00157 Pkinase 4.1e-18 CL0016