Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00145 TTTGGAATTTCCTTCCACCACCAAAACTAACCCACTCATTTTGTTCTTCTTCTCTGATTCTTTTCTCTTTTTTTTTAATCATGGAATAAGGAAAGGAGGAACAAACAAATCATACCGATTTTCCCCAAATCTACAATTCAACCTTCACCTTTTCATCCTATCTTTGAACTGATCACTGTTTTTTAATGCACAAGGAATTATCCAGATACTAAATTTTCCACCATATCTATTAAGTTGTGTGTGAGACTATGTAAGGGATGGTATCAGCTACAATTAGGCGAATTGTGTCGCCCTGTTGGAGACCATCTGATGCGGGTGAAATTTCTAGTAGGCATGGAGATGCAAGTGGACGTGTTAATGGTTTGTTGTGGTATAAAGATTCAGGAAGACATGCACATGGTGAATTCTCAATGGCAGTTATTCAGGCAAACAATTTGTTAGAGGATCAAAGCCAACTTGAATCCGGCTCCTTGAGCTTAAATGAGGGAGATTATGAAGGAACTTTTGTTGGTATATACGATGGACATGGAGGTCCAGAAGCTTCCCGGTTTGTCAATGACCATCTATTTAAAAATATCAAGAAATTTACTTCGGAAAATAATGGAATGTCCGCTGATGTTATCAGTAAAGCATTCTTGGAAACTGAAGAAGAATTTCTTTCTGTAGTAGAGAAGCAGTGGCTGCAGAAGCCACCGTTAGCATCAGTTGGATCTTGCTGTTTGATTGGCATAATATGCAGTGGGGAGCTGTATATTGCAAATGCAGGAGATTCTCGAGCAGTATTAGGTAGAATGGATGAGACTACAAAAGAGATTAAGGCTGTTCAACTATCAGATGAGCACAATGCTAGCCTGGAATCAGTCAGAGAAGAGTTGCATTTATTGCATCCTAATGATCCGCAGATTGTGGTTATGAAGCACCAGGTCTGGCGCGTGAAGGGTCTGATTCAGATTTCAAGATCCCTTGGTGATGCTTATCTAAAGAAGGCAGAGTTTAATAAAGCACCATTATTGTCAAAATTTCGACTCTCAGAACCCTTTGAGAAGCCAATCCTTAAAGCTGAACCAGCAATACTAGTACAGAAACTGTGTCCTCAAGACCAGTTTCTTATATTAGCATCAGATGGGTTATGGGAGCAAATGAGCAATCAAGAAGCAGTAGACATTGTGCAGAGCTATCCACGGAATGGAGTAGCGAAGAAACTAGTGAAAACTGCACTTTGTGAAGCAGCAAAGAAAAGAGAAATGAGATATTCAGACTTGAAAAAGATTGACCGGGGGGTGAGAAGACATTTCCATGATGACATCACGGTTATAGTTTTGTATCTTGATTCAAATATTTTGACCCGTGCCAGTTCACGTGTACCCTTGGTTTCGATCAAAGGAGGAGGTGATGGTGGTTATGGTATCGGTATTATTGATGCCTAG 1427 0.4001 MVSATIRRIVSPCWRPSDAGEISSRHGDASGRVNGLLWYKDSGRHAHGEFSMAVIQANNLLEDQSQLESGSLSLNEGDYEGTFVGIYDGHGGPEASRFVNDHLFKNIKKFTSENNGMSADVISKAFLETEEEFLSVVEKQWLQKPPLASVGSCCLIGIICSGELYIANAGDSRAVLGRMDETTKEIKAVQLSDEHNASLESVREELHLLHPNDPQIVVMKHQVWRVKGLIQISRSLGDAYLKKAEFNKAPLLSKFRLSEPFEKPILKAEPAILVQKLCPQDQFLILASDGLWEQMSNQEAVDIVQSYPRNGVAKKLVKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLYLDSNILTRASSRVPLVSIKGGGDGGYGIGIIDA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00145 389 CDD PP2Cc 50 357 IPR001932 -
Pste4g00145 389 FunFam Phosphatase 2C family protein 38 367 - -
Pste4g00145 389 Pfam Protein phosphatase 2C 73 327 IPR001932 -
Pste4g00145 389 SMART PP2C_4 41 355 IPR001932 -
Pste4g00145 389 ProSiteProfiles PPM-type phosphatase domain profile. 46 357 IPR001932 -
Pste4g00145 389 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Pste4g00145 389 PANTHER PROTEIN PHOSPHATASE 38 355 IPR015655 GO:0004722|GO:0006470
Pste4g00145 389 Gene3D - 38 367 IPR036457 -
Pste4g00145 389 SUPERFAMILY PP2C-like 58 358 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00145 Pste-Chr4 1342701 1347318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00145 3 379 PP2C-type Phosphatase Gene Family AT3G12620 73.545 0.0 584