Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00139 CCCTCATACTCTCCATCATCCTAGCTAACTAACTACTCCCTCTCTAAGCACGTGTTTTTTCCCCCTCCCACTCTTTTTACTATAGATATACATTTTACCTTTTTCCATTTCCCTTCATTCTTCTTCACACCATGTTGCACGATGTTTTTGATCACCCTATGCCTAAGCCTGACCCCCAACACCAACAACTTCCCATTGATGAAATTTCAAGTCCTCTCAGTGCTCGAATTTTCGAACTTTGTAACAGCGATCTTTTTCCAGAGGCTTTGCCAAATTCTGAGGTTACTTCCAGCTCTAACTGTTGCTATGAGGAGAACTCATATGCCACAACAAACATAACTGTAGATGCAGAAAATAAATTGAATAGCAATAGCAACACAGTCACCACCCCAACTAGCACTACCACCACCAACAATAACACAACCAATAGTAGTAACCTGTCTATTATCTTCGACTCCCAAGAAGAAATTGACAATGACATCTCTGCCTCCATAGACTTCTCGCTATCTCCTTCTTTCAATGTTCCCCCATTTCTCCCAGTCACATCCCAGCAAGAACAGTTTGATTTCTCTTCTGTGCAATCTCAGGTTCAACTAGCAACATGTTCAGTTGTTGAGGGCTTCTCTCAGTATCCCAGTGACTCTGTTGCACCTCCTCTTATGGGGGCTCCATTACCCTCTGTTTTTGAAGAGGACTGCATATCTTCTGTCCCTTCTTATGTGCCACTTAATCCTTCATCTCCTTGCACTTATCTCAGTCCTGGCATGCCGCCATACATGCCTCATGGCCCCCTTACTACTGCTTTATCAACTGATAGCTCTGGATTTTTTGGTGGGAACATTCTTCTCGGTTCTGAACTTCAGACACAAGAATTGGATTACCAAGGAGAAAATGGAAGAATGTATTGTACAGATTCACTCCAGCGGGTGTTTAATCCTCCAGACCTTCAGGCACTTGGTACCGAGAGTCAGCAACTGGTACCTGGGGCTGGGAGTTCTGCCATAACACCAGAAATCTCAAACTTAGAGGACTCCTCCTTTAAGGTTGGAAAACTTTCTGTTGAACAAAGGAAAGAAAAAATCAACAGATACATGAAGAAAAGAAATGAAAGAAACTTCAGCAAGAAAATTAAGTATGCCTGCCGTAAAACTCTGGCAGATAGCCGACCTCGGGTTAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGAAACCAATAGAACTACCAGTAGCAATCATGAAGAAGATGACGAGGAAGAAGTAGTTGTGAAAGATGAAGATGATATGGTTGATTCCTCAGATATCTTTGCTCATATCAGTGGGGTGAACTCCTTCAAATGCAACTATTCCATCCAGTCTTGGATTTAACTTAATAGTTTGGATCAGTATAACTACATTTAGCTTCTGTAGATTTTTGCATGGCCATATACGACCCCAGATTTCCCCTATCTGGTTTTGATGGATGAGGAAACAGAATAATTGGGGTCATAATACTATACAATAAGTGAATGAAGAACCTATAGAAAGAAACTGTATACATTTTTTTGCAGACACTACCTTTCTTATTACTTAAATGTATTAAGAATCACATGTTGTATTAACTCAAAAAATTTCAACAGTCTCCATGTACTATTAGTGGAGCTCATTTTTTATAATATAGTGAGGAACTAGTTTTGGTTAGGTGGAAGGGCATTTGAATATTTGGACTGACTTTGTCTCTGATCATCTTGAATACTATTTGGTTGATAAAAAGAAAAAAA 1759 0.4002 MLHDVFDHPMPKPDPQHQQLPIDEISSPLSARIFELCNSDLFPEALPNSEVTSSSNCCYEENSYATTNITVDAENKLNSNSNTVTTPTSTTTTNNNTTNSSNLSIIFDSQEEIDNDISASIDFSLSPSFNVPPFLPVTSQQEQFDFSSVQSQVQLATCSVVEGFSQYPSDSVAPPLMGAPLPSVFEEDCISSVPSYVPLNPSSPCTYLSPGMPPYMPHGPLTTALSTDSSGFFGGNILLGSELQTQELDYQGENGRMYCTDSLQRVFNPPDLQALGTESQQLVPGAGSSAITPEISNLEDSSFKVGKLSVEQRKEKINRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGETNRTTSSNHEEDDEEEVVVKDEDDMVDSSDIFAHISGVNSFKCNYSIQSWI 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00139 411 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 96 372 IPR045281 GO:0009909
Pste4g00139 411 MobiDBLite consensus disorder prediction 348 370 - -
Pste4g00139 411 MobiDBLite consensus disorder prediction 348 378 - -
Pste4g00139 411 Pfam CCT motif 313 355 IPR010402 GO:0005515
Pste4g00139 411 ProSiteProfiles CCT domain profile. 313 355 IPR010402 GO:0005515
Pste4g00139 411 MobiDBLite consensus disorder prediction 78 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00139 Pste-Chr4 1294776 1298371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00139 293 362 C2C2-CO-like Transcription Factor Family AT5G24930 40.000 2.92e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste4g00139 CCT 3.5e-19 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00139 4 1294776 1298371 Pste4g00139 4 1294776 1298371 ECH