Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00109 CCCTAACAAGGTAAATTCCTCTCTCCCGTTCCTTTCACCTCTATTTTCGCTTCTCTAATTTTGGTTCCCTTTCTCTTATTTCCCTTTTCCTCACTTTCCGTCTTTTCAATTTTCTGGCCTCTTCGGGTTCTCCTTCTGCCAATCCGATTTGGCCGCCATTCCTTTTTTTGGTTCCTCTATAATTTACTTTTTCATTTTTTTTTGTTTGATGGACCGCAGACACTACCACCATCGTCCTCCTCATTTGGCACATGCTTCTCCGCCTGATTACTTTGTCCGCCTTGGGAACACAACTTACAAAGACGATCTATATCTGAGGAAGAGGACAAGGATGCGTCGGTGGCTGTGTTGCACTTGTCAGGTGGAAGAGTCTTACCCGTCAAATGAAAATGAACACCTCAAAAGCCCTAGGAATTATGGAGATGGCAACCAAAAAGGCCCGAAGGTGTCGCCTCCTGTCAAGCCTGAAGCACAAAAGGCACCACCACCTATTGAAGCTCCAGCCTTGTCTTTAGATGAGTTGAAGGAAAAGACTGACAACTTTGGTTCAAAGGCATTAATTGGGGAAGGATCGTATGGAAGGGTGTATTATGCAACCTTAAACAATGGAAAAGCTGTGGCAGTGAAAAAGCTTGATGTTTCATCTGAACCTGAATCTAATAATGAGTTTTTGACCCAGGCATATTGTTATTGTCAGTTTATCAGTATTCTTATTCAGCGTTCCATATTTCAGGTTTCCATGGTCTCAAGATTGAAGAATGAAAATTTTGTTGAGTTGCATGGGTACTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCACAACCAGGGCCAACTCTTGATTGGATACAGCGAGTTAGAATTGCAGTTGATGCAGCAAGGGGACTGGAATATTTACATGAGAAAGTTCAACCACCGATTATACACAGGGATATCAGATCAAGTAATGTGCTGATCTTTGAAGATTACAAGGCTAAGATAGCTGATTTTAATCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCAACTCGTGTATTGGGAACTTTTGGCTATCATGCTCCAGACTTCTACCGTGTTGCGAAACTTTACAGATATGCAATGACTGGGCAGTTGACTCAAAAAAGTGATGTATATAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTCGACCATACCATGCCTCGAGGGCAGCAGAGTCTTGTAACATGGGCTACTCCAAGATTAAGTGAAGATAAGGTGAAACAGTGTGTGGACCCAAAACTGAAGGGAGAATACCCCCCTAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCCCTTTGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTGCAACCACTTCTGAAGTCTCCCGCTCCTGTTCCAGAAAGTTGAAGCAAATAAATTGGAAGTTCTAAACTGCATATTCTGCACAGTTCGATTCAATTATCTCCAGATTTCATCAAATACTGCGGATATATCTATATATAATTTTTCTTTTTGTTTGAGATTGGATGTGTACGATTGGATTCGCTCGTTTCATGTCATTGTTAAATTCCATGTATTTATGGCATCATACTTGTAGTGCTGAGTCTGCTGACATCAATAGAGCCATAATATGCAACAATAGGTTTGGGTTGCTTGGTGGATATTTTGTGTGGGTAAATGTTGTTTGTCACTTGACGTTAATGCCTCCCCCCATATTCTTTATTTGTTTTTACTATCAAACTAAGGTGATACTTGTCTTGAAAGACTTATATATTTGTTAGTATCTGCC 1883 0.4132 MDRRHYHHRPPHLAHASPPDYFVRLGNTTYKDDLYLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRNYGDGNQKGPKVSPPVKPEAQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQAYCYCQFISILIQRSIFQVSMVSRLKNENFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPDFYRVAKLYRYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKSPAPVPES 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00109 430 FunFam PTI1-like tyrosine-protein kinase 3 208 426 - -
Pste4g00109 430 SUPERFAMILY Protein kinase-like (PK-like) 96 421 IPR011009 -
Pste4g00109 430 Gene3D Transferase(Phosphotransferase) domain 1 208 425 - -
Pste4g00109 430 MobiDBLite consensus disorder prediction 57 95 - -
Pste4g00109 430 Pfam Protein tyrosine and serine/threonine kinase 175 417 IPR001245 GO:0004672|GO:0006468
Pste4g00109 430 ProSiteProfiles Protein kinase domain profile. 112 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00109 430 Gene3D Phosphorylase Kinase; domain 1 87 206 - -
Pste4g00109 430 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 45 425 - -
Pste4g00109 430 SMART tyrkin_6 112 417 IPR020635 GO:0004713|GO:0006468
Pste4g00109 430 ProSitePatterns Protein kinases ATP-binding region signature. 118 141 IPR017441 GO:0005524
Pste4g00109 430 ProSitePatterns Tyrosine protein kinases specific active-site signature. 258 270 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00109 Pste-Chr4 1111393 1116266 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00109 46 418 Receptor kinase-like Gene Family AT4G02010 42.553 5.36e-85 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Pste4g00109 PK_Tyr_Ser-Thr 2.5e-35 CL0016