Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00092 ATGGAATACGGATGGTTGGTGTTGGGAATATTGACATTATTAGTATTGGTAATATTGTTGAAACGTAAGAAGGATGGAGAGGGAGAGTTTCCACTTTCACTTCCACTTCCACCTGGACCGAGACGGTGGCCAGTGGTTGGCAACATGTTCCAAGTGGGCTTAGGCAGGTCAGCACATGAGTCATTTACAAAACTGGCTCATAAACATGGTCCAATAATGAGCATATGGCTAGGTTGCATGTGCACAGTGGTTATCTCCTCGAGCAAAGTGGCTGGTGAGATGTTCAAAAACCACGACACTGTCCTTGCTGGCAGGAAGATCTACGAGGCCATGAAAGCCGAGCATGGCAGGGAGGGTTCCCTCATCACTTGTCAATACAACTCACACTGGCGCATGCTCAGACGCTTGTGCACCACCCACTTGTTCCTCGCCACTCGCTTAGATGCCACGCGCCCCCTCCGTTCTTATTGCATCCACCGCATGCTCCACCTCATACATCTATCCCCTCCCCTTGTTCATCTTCGCCCCTTCTTTTTCTTTATGACCTTTAACCTTATTGGTAACCTCATATTCTCAATGGATTTGTTGGACTCTGAAATCGACAGAGACACTTGGTTTACATTTTATTCCCATGCCTCTAAGGTTATGGAGTATGCTGGGAAGCCCAACCTGGCAGATTTCTTCCCATTTCTCAAGTGCCTTGACCCTCAGGGTATAAGGAGGAATACCCAATTCCATGCTAACCAAGCCTTTCACATTGCTGGTTGCTTCATCAAACAAAGGATGCAAAATGGATCCAATTCAAATAGCAAGGACTATCTTGACGTCCTCTTGAACTTTCGTGGGGATGGTGTCACCGAGCCGTCTACTTTTTCATCAACAACTATTAACGTCATTGTCCTTGAAATGTTCAATGCAGGGACAGACACCACAACAAACACAATGGAATGGGCGATGGCAGAGCTTCTGCACAACCCAAAAGCGCTAAAGAAAGTGCAGATGGAGTTAAGGAGTAAAATAGGGGCAGATAGGAATATGGAAGAAAAGGACATAGAGAATCTCCCCTACCTCCAAGCAGTCATCAAGGAAACACTAAGACTTCACCCACCTCTTCCTTTCCTGGTTCCTCACATGGCCATGGACTCTTGCAACATCCTTGGCTACAATATTCCCAAAGACTCACAAATTTTAGTCAATGTTTGGGCAATTGGAAGGGATTGCAAAGTGTGGGATGCTCCCTTATTGTTCAGGCCTGAAAGGTTTCTGGAGCCCAACACCATGGATTACAAGGGACGCCATTTTGAGTTTATACCCTTTGGTTCGGGTCGAAGAATGTGCCCGGCCATGCCTCTAGCCTCTCGTCTGCTTCCCCTTGCTTTAGGTTCCCTCTTGCACTCCTTTGATTGGCTTTTGCCAGATGGCCTCAAACCAGAGGATATGGACATGACAGAGGGTATGGGAATCACACTAAGAAAAGCCGTTCCTTTGAAACTCATACCAGTGCCCTACACACCACCCAAATAATCTACGAGCACTCCTTATCATCTACAATTGCTTCCCATTTTCGTTTCCTACGTCTCAATGTAAGATTACCATAACGAACATTGTTTGGTTTCAGTGGCGTTCCAATGTCTCATCAGATGTAATCACTTATAATATGATATAATAATGCACCAACTGCTTGTTTATCTTAAGGAGAATGATTCGTGACCGAAATATCACCCATGTACATCTGTTTACGTGGCAATTTTATTAATTTTTTAATTGAAAAAAATTAAAAACGAAAATGGAAATTGCTAGGTGTAAAATCTACGTTCTTCTTCTCACTTGTAAAATTGCGTTCTTCTTCTCGTCTCAAAACCCTATACTTTGCTTCTTTCTTTG 1884 0.4432 MEYGWLVLGILTLLVLVILLKRKKDGEGEFPLSLPLPPGPRRWPVVGNMFQVGLGRSAHESFTKLAHKHGPIMSIWLGCMCTVVISSSKVAGEMFKNHDTVLAGRKIYEAMKAEHGREGSLITCQYNSHWRMLRRLCTTHLFLATRLDATRPLRSYCIHRMLHLIHLSPPLVHLRPFFFFMTFNLIGNLIFSMDLLDSEIDRDTWFTFYSHASKVMEYAGKPNLADFFPFLKCLDPQGIRRNTQFHANQAFHIAGCFIKQRMQNGSNSNSKDYLDVLLNFRGDGVTEPSTFSSTTINVIVLEMFNAGTDTTTNTMEWAMAELLHNPKALKKVQMELRSKIGADRNMEEKDIENLPYLQAVIKETLRLHPPLPFLVPHMAMDSCNILGYNIPKDSQILVNVWAIGRDCKVWDAPLLFRPERFLEPNTMDYKGRHFEFIPFGSGRRMCPAMPLASRLLPLALGSLLHSFDWLLPDGLKPEDMDMTEGMGITLRKAVPLKLIPVPYTPPK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00092 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Pste4g00092 507 Gene3D Cytochrome P450 32 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 Pfam Cytochrome P450 37 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 502 - -
Pste4g00092 507 FunFam Cytochrome P450 76C4 31 499 - -
Pste4g00092 507 CDD CYP76-like 66 500 - -
Pste4g00092 507 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste4g00092 507 SUPERFAMILY Cytochrome P450 37 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00092 Pste-Chr4 936112 938104 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00092 36 503 Cytochrome P450 AT3G52970 58.384 0.0 559