Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00085 ATGTTACCAGGCTTAAGGTTCACCAATATGGTTTCTTCTTCTTACCTTTCTCTCACTATGACTCGTTCTCTCTTATGGTCAAGTTTGCGTTTTCCGCAACTCTGGCAAATCCTTGGTGGACAGGCCAGGGGGTTATCTGGGGTTGACCCAGGAACCCATTCACCTGGTGGTCTAGGTAAACGCCACACAGACCTTGGAATCAACGAAACCAGTGGTGGGCACAGTAGAGAAGAAGATGAAGATAATAGAGACGAACCAAAAGAGGGTGCGGTTGAGATTGGAAGCCGCAGACCAAGAGGAAGACCTCCTGGATCAAAAAACAAGCCAAAACCACCCATTTTTGTGACAAGGGACAGCCCAAATGCCCTGAGGAGCCACGTGATGGAGATAACCGGAGGAGCTGATGTTGCAGAAAGTGTAGCTCAATTTGCAAGGAGGCGTCAACGTGGGGTTTGTGTGCTCAGTGGTAGCGGCTCAGTGGCCAATGTTACTCTTAGACAACCTGCTGCTCCTGGTGCTGTGGTGGCACTTCATGGAAGGTTTGAGATTCTCTCCCTCACTGGGACTTTTCTACCTGGCCCTGCTCCTCCGGGATCCACAGGACTAACTGTGTATCTTGCTGGAGGTCAAGGTCAGATAGTGGGGGGAAGTGTGGTTGGATCTCTAGTTGCAGCAGGACCCGTGATGGTAATTGCTGCAACTTTTGCTAATGCAACATATGAGAGACTTCCTCTTGATGAAGATGATGAGGGGCCTAGTTCGGCGGCCGCCGCACAAGGCGGAGGATCGCCCCCACCCCTTGGAATTGGGAGCAGTGGGGGTGGCCAGTTGCCTGGTGGAATTCCAGATCCATCATCTCTGCCTTTGTATAATCTTCCACCCAATGGAGGGGGCCAAGTGGGGCATGAAGCCCTTGCTTGGGCTCATGGACGAGCACATTTCTGAATTATGGGGATGCGCCAAAAGGTGCTCGACGAAGAGCTCTAATAATCAAATTCAACCTGCTTGTATTCATCTTGAGATGTATTTTGAAGGATAGGAGTTGGAAAAAGTTGCAAGGTTAGATTACTAATTATATAGTTGTGAAGAACTGTATGTGAGAGAGGAAGCTACCTAGCTAGCCAGCATGCTTATTTTATCGATGTACATGGATTATGAGCCTCCTCTTTTCTCTTTTGCTTCTGTGTTTCGAATAAAAAAGATGATCATGGGCGTCTTTTT 1221 0.4865 MLPGLRFTNMVSSSYLSLTMTRSLLWSSLRFPQLWQILGGQARGLSGVDPGTHSPGGLGKRHTDLGINETSGGHSREEDEDNRDEPKEGAVEIGSRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEITGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPAPPGSTGLTVYLAGGQGQIVGGSVVGSLVAAGPVMVIAATFANATYERLPLDEDDEGPSSAAAAQGGGSPPPLGIGSSGGGQLPGGIPDPSSLPLYNLPPNGGGQVGHEALAWAHGRAHF 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00085 314 ProSiteProfiles PPC domain profile profile. 120 257 IPR005175 -
Pste4g00085 314 MobiDBLite consensus disorder prediction 46 118 - -
Pste4g00085 314 CDD DUF296 124 235 IPR005175 -
Pste4g00085 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 248 - -
Pste4g00085 314 MobiDBLite consensus disorder prediction 244 295 - -
Pste4g00085 314 FunFam AT-hook motif nuclear-localized protein 123 250 - -
Pste4g00085 314 MobiDBLite consensus disorder prediction 71 95 - -
Pste4g00085 314 Gene3D - 123 250 - -
Pste4g00085 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 70 295 IPR014476 GO:0003680
Pste4g00085 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 236 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00085 Pste-Chr4 886251 888493 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00085 86 311 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 68.103 2.61e-93 276