Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00079 CAAAAATCTTACTCCCTAAAGAGGCATAAGATTGTGTGTGTAATTGAAGAGGTTTTGATAGAGAGAATAAAAGAGGAAGAAAGATGGTGAAAGAAACAAGGAGATGCAACGATGGTGACATTAACAAGGAAAGGTGTTTGATGTTGTTTGGTGTGAACCTTCTTGCAAAAAACCCTACAAAAAAAGGGAAACCATGGACTGAGGAAGAGCACAAGGATTTTTTGTGTGGTTTAAAACACCTTGGAAAAGGTAATTGGAAGGAAATCTCAAAGAATTATGTGAGATCAAAGACTCCCACTCAGGTTGCTAGTCATGCACAAAAGTATTTTCTCAGAATAGGTGCATTTGAGACAAGAAAACGTAGAAGAAGCCTTTTTGACATTCCTTTGGTT 392 0.3724 MVKETRRCNDGDINKERCLMLFGVNLLAKNPTKKGKPWTEEEHKDFLCGLKHLGKGNWKEISKNYVRSKTPTQVASHAQKYFLRIGAFETRKRRRSLFDIPLV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00079 103 Pfam Myb-like DNA-binding domain 36 82 IPR001005 -
Pste4g00079 103 SMART sant 34 84 IPR001005 -
Pste4g00079 103 SUPERFAMILY Homeodomain-like 31 85 IPR009057 -
Pste4g00079 103 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 86 IPR017930 -
Pste4g00079 103 ProSiteProfiles SANT domain profile. 33 86 IPR017884 -
Pste4g00079 103 ProSiteProfiles Myb-like domain profile. 30 82 IPR001005 -
Pste4g00079 103 Gene3D - 36 87 - -
Pste4g00079 103 NCBIfam myb-like DNA-binding domain, SHAQKYF class 33 84 IPR006447 GO:0003677
Pste4g00079 103 CDD SANT 37 82 IPR001005 -
Pste4g00079 103 PANTHER TRANSCRIPTION FACTOR KUA1 32 100 - -
Pste4g00079 103 FunFam transcription factor MYB1R1 36 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00079 Pste-Chr4 843727 845599 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste4g00079 Myb_DNA-binding 2.2e-13 CL0123