Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00060 AGATTTCAAGCCACACCTGCTCATGGTCTTAGTCCAGGTGGGCTATAGCCTCTTATACCTCATAACCAAAGCCTCCTTCAATCATGGAATCAGCCCTTATGTGTATGTAACTTATCGGCATATTTTGGCTACGGTTTTGATGCTTCCTTTTGCATACTTTCTGGAGAGGTACATATGCGTTTCTCTTGAAGAGTTGGTCTGCATTTGCATGATTCTCTTCTTTATGGCATGCATTCTCTCTCGCAGAAATGCAAGACCAAAGCTGACATTTGTTCTTTTCATGGAAATTTTTGTGCTTTCTATGCTAGGGGTTAGTCTGACTGCTAATGTGCACTTTGCAAGTCTGCAATACACTAATCCGACCTTCATTGTTGCAATGCTCAACATCATACCTACCCTTACCTTCATTCTTGCCGTGACATTCAGGTTCGAGGTTCTTGATCTTCAAAATCCTCGAGGGATAGCAAAAGTTTTGGGGACCTTGATCTCCCTGGCTGGTGCGTTGATCATGACACTGTATAAAGGACCCGTTACCAGAAATTTGTGGCCTCCTCTGATCTATATTCCAGCAAAAACTGCTGCTATCAATGAGAACTGGTTTAAAGGTTCACTTCTTACAGTTTTAAGCTGCGCTACATGGTCTATGTGGTACATTATGCAGGCAGCCACTTTAAAAAGATACCCTGCCCAATTGTCACTCGCCACGTGGATGTCCTTTGTTGGAGCTGCACAATCAGCTGTTTTCACAGTTATAGTACAACACAATCGTTCAGCATGGTCTATGGGGCTCAACATTGATTTGTGGTCCACAATATACAGTGGAATTGTCGTTGCTGGTTTAATATCGTATGTTCTACTATGGTGCACCGAGAAACAAGGACCAGTTTTTGTCACAATGTTTAATCCTCTTACTACGATATTAGTGGCATTTGTAGCCTACTTTGTCCTTGGAGAGAAACTTTATTTGGGCAGCATCATAGGAGCATTTACAGTGATCATTGGTCTGTACTTGCTAATGTGGGGCAGAAGGGAGCATGAGGTTCCGCAGTGCAGTAATGAAGATCCAGAAAGCAGAACAAAAGAGTTCAGGCCACATCTGTTCATGGTCTTAGTCCAGGTGGGCTTAAGCTTCTTATATTTGATCACTAAAGCCTCCTTCAACCATGGTCTCAGCCCTTATGTGTTTGTAAGTTATAGGCAGATTGCAGCTTTGGTTGTGATGTTCCCTTTTGCATACTTTTTGGAGAGAAAAGCAAGACCACACTTGACGCTTGCTCTTCTTGTAGAAATATTTATGCTTTCTTTGCTGGGGATTGATTTGACAATTAATTTGCACTTTGTAAGCCTGAAATACACAAATCCTACCTTCGTTGTCGCAATGCTCAACACCATACCTACCCTTACCTTCATTCTTGCAGTGGCACTCAGGTTTGAGGTTCTTGATCTTCAAAATCCTCGTGGGATAACAAAAGTTTTGGGGACTTTGATCTCCCTAGCTGGTGCATTGATCATGACACTCTACAAAGGCCTCATTATGACAAATTTGTGGCCTCCTCTAATCCATATTCCAGCAAAAAGTGTTGCTATCAATGAGAGCTCGTTAAAAGGTTTACTTCTTAACGTTACAAGCTGTGTTACAATGTCTATGTGGTTCATTATGCAGGCAGCCACTTTGAAAAGATACCCTGCCCCACTGTCACTCACCACGTGGATGAGCTTCCTTGGAGCAGCCCAAGCAGCTGTTTTCACAGTTATAGCAGAGCGAAACCCTTCTGCATGGATTATAGGGCTCAACATTGACTTGTTGTCCATACTATACAGTGGAATTGTCGTTGCCGGTTTGATAATCTATGCTCTACTATGGTGCAATGAAAAAAAAGGACCAGTTTTTACTACAATGTTTTACCCTCTTTCTACGATATTGGTGGCAATTATAGCATACTTCGTCCTTGGTGAGAAACTTTATTTGGGAAGATGCCGATTATTAGCTAATGATGCTTACAGCATGCCACATAATTTATTTATTCTTCTACTCGGTCCTAAAATGAGTAAAATCATGCACATTCAACTTCCAAGTATTATTGACCCTTTGATGAGAAGTAATTTAGGGGAAAGTAGAAACAAATCAAATGACATTAGCGTCGTGTTTGAGTTTGTGAATCAGGTCATCGACAGAAGCAACAAGAACTCCTGGTTTTCTCTTGGGAGGTTCTGTGACTTGAAGAATCTCAAATCAGATTTGATCTGCAGATTGAACTCCTCCAGAGTGAATTTGTTGACTGGCTTTGACTTGGCTTTCATTATGTTGGGAAGAGTAGCATACCTTGGTTGGTTGAGCCTCAGGTCAGTACTGCAGGTCAAAATGAACGTA 2371 0.4167 MVLVQVGYSLLYLITKASFNHGISPYVYVTYRHILATVLMLPFAYFLERYICVSLEELVCICMILFFMACILSRRNARPKLTFVLFMEIFVLSMLGVSLTANVHFASLQYTNPTFIVAMLNIIPTLTFILAVTFRFEVLDLQNPRGIAKVLGTLISLAGALIMTLYKGPVTRNLWPPLIYIPAKTAAINENWFKGSLLTVLSCATWSMWYIMQAATLKRYPAQLSLATWMSFVGAAQSAVFTVIVQHNRSAWSMGLNIDLWSTIYSGIVVAGLISYVLLWCTEKQGPVFVTMFNPLTTILVAFVAYFVLGEKLYLGSIIGAFTVIIGLYLLMWGRREHEVPQCSNEDPESRTKEFRPHLFMVLVQVGLSFLYLITKASFNHGLSPYVFVSYRQIAALVVMFPFAYFLERKARPHLTLALLVEIFMLSLLGIDLTINLHFVSLKYTNPTFVVAMLNTIPTLTFILAVALRFEVLDLQNPRGITKVLGTLISLAGALIMTLYKGLIMTNLWPPLIHIPAKSVAINESSLKGLLLNVTSCVTMSMWFIMQAATLKRYPAPLSLTTWMSFLGAAQAAVFTVIAERNPSAWIIGLNIDLLSILYSGIVVAGLIIYALLWCNEKKGPVFTTMFYPLSTILVAIIAYFVLGEKLYLGRCRLLANDAYSMPHNLFILLLGPKMSKIMHIQLPSIIDPLMRSNLGESRNKSNDISVVFEFVNQVIDRSNKNSWFSLGRFCDLKNLKSDLICRLNSSRVNLLTGFDLAFIMLGRVAYLGWLSLRSVLQVKMNV 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00060 783 Pfam EamA-like transporter family 528 649 IPR000620 GO:0016020
Pste4g00060 783 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Pste4g00060 783 Pfam EamA-like transporter family 359 498 IPR000620 GO:0016020
Pste4g00060 783 PANTHER WAT1-RELATED PROTEIN 1 344 IPR030184 GO:0016020|GO:0022857
Pste4g00060 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 391 501 - -
Pste4g00060 783 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00060 Pste-Chr4 684095 697138 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00060 338 650 Nodulin-like Gene Family AT5G07050 41.176 1.27e-69 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00060 4 684095 697138 Pste4g00060 4 684095 697138 ECH