Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00058 GACCCAAAGGAAATGGCAAATGGCATTGGCTGCTGGGCTTAAAGTATTACACAAGTGGCATTGAATCACCAACTTGCACCTTTTTTAATTTTGTCCACTTCCAATTTTTCTCTGCTTTTCTTCAACTCCAAATCGGAAATTGGAATCCTCTCTTGCTGCAGCTCCATGTACCCCTCTTCCTCATCCTCCTCATCCTCCTCCTCTCAGTCCATGAGCCAGGCCGGTGCCGGACTCACCCGCTACGTCTCCGCACCGGGCTCTCTGCTCACCAGCACCGTCGATGCCGTCATAGGGGGATCACGCCCTTACTATTCCGGAGACTCAACCTCCAAAGACCGCACCACTTACCAAAATCAGGCCTTGGTCCGTCAGAAAAGCTCCCCCGCGGGTTTCCTCGCTGTCCCACACTCACACCCACACACTAATGAGGCAGCAGGGCCTGGGACGGGTTTCACAATCACGCGTGGGGTCGGGGGCCATTCACGGTTGAAGTCACAATTGAGCTTCACGGGTCACTGCGGGGAAAACAGTAACAGTAACAGTAACAGTAACAATGGGAATGGGAATGGGAATGTGGTGGTGGGTGATCCGATGGGGATGAATATGGGTATGAGTATGGGGATGGGGATGGGGATGGAGGGGTGGGACAATTCCATAGCTTTCTCGGCTGCTCCCACAAAGCGGTCCAAAAATAGCAACGATCCGGACATTGTACATTGCCTGAATGCCTTGGAATCGCAGTTCAGTCTCCCACACGAAATCGACAAGCTATTGCACATTCCCCAAGATTCCGTCCCTTGTAAAATCCGTGCCAAGCGAGGTTGTGCCACTCATCCCCGTAGCATTGCCGAGCGGGAGAGACGAACCAGAATTAGTGGCAAGCTCAAAAAATTACAGGACCTTGTGCCTAACATGGATAAGGTTTATTATGTCTCTTTCTCTCTGCTTTTTTTATTTATTTATTATATTCCCTTCTTCACTCTTTTTCGAAATGCTAGCAAACAAGCTATGCTGACATGCTCGATTTGGCCGTTCAACATATTAAAGGTCTTCAAACTCAGGTTCAGAAGCTTCACAAAGAACTGGAGAATTGCACTTGCGGATGCAAACAAGGCAAATAACTTATTTTGTTTTACGTGATTCCATGTCAACGTGCGTAGAAGTCAAGGTTTTGATGGGAAAGAATTAAAAGTGATTTTGTACCGACCTACTTAAACGAATAACGAAGGAACCGAAAGTTTGTAGATTGTCAATTCAACAATTGTATATACAGTGCATGTTGTAATATGGTAGTGTAGAAAAATTTCTTTGAGAATTGCCTTTCAAATTCGACGTTGATTTTCTGTTGAGATTATTTATTTTCTTCTTTGGAATCAGAGCCAGAGTAGAAGTGAGAAGCGATGAATTGAAAATTTAGAACAAAACGATCGATCCTGTTCTAAGTTTGATACAATTAGGAATGAAATCTACTTTCTGCA 1478 0.454 MYPSSSSSSSSSSQSMSQAGAGLTRYVSAPGSLLTSTVDAVIGGSRPYYSGDSTSKDRTTYQNQALVRQKSSPAGFLAVPHSHPHTNEAAGPGTGFTITRGVGGHSRLKSQLSFTGHCGENSNSNSNSNNGNGNGNVVVGDPMGMNMGMSMGMGMGMEGWDNSIAFSAAPTKRSKNSNDPDIVHCLNALESQFSLPHEIDKLLHIPQDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKVYYVSFSLLFLFIYYIPFFTLFRNASKQAMLTCSIWPFNILKVFKLRFRSFTKNWRIALADANKANNLFCFT 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00058 324 MobiDBLite consensus disorder prediction 112 136 - -
Pste4g00058 324 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 10 257 - -
Pste4g00058 324 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 220 293 IPR011598 GO:0046983
Pste4g00058 324 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 223 252 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00058 Pste-Chr4 664583 667699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00058 66 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 45.116 6.42e-41 144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00058 4 664583 667699 Pste4g00058 4 664583 667699 ECH
Pste5g00435 5 2870547 2873275 Pste4g00058 4 664583 667699 ECH
Pste4g02971 4 21160189 21163887 Pste4g00058 4 664583 667699 ECH