Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste4g00037 | GGTGTTGGAGAAACGAAAACGAAAATCAGCTGGCGTGAGAAGCAGCTGAACAGAAGGAGAGGAATGGAGCAGGAAGAGCACGAAGTGTACGGAGCTGACATTCCCGACGATGAGGTTGATATGGACGCTGACGCCGAACAACAAGACGACCAACTTCCCCCGAATCACACTACCAAGGAATTGGAGGATATGAAGAAGCGCTTGAAGGAGATCGAGGAGGAGGCTAGCGCGCTTCGCGAAATGCAGGCCAAGGTTGAGAAAGAGATGGGTGCTGTTCAAGATTCGTCTGGTCCTTCTGCTACTCAAGCTGAGAAGGAGGAAGTGGATGCTCGGTCAATCTATGTTGGTAATGTTGACTATGCATGTACACCTGAAGAAGTCCAGCAGCATTTTCAGTCCTGTGGAACTGTGAACAGGGTGACAATACTGACGGACAAATTTGGTCAACCCAAAGGATTTGCTTATGTAGAATTTGTTGAGATTGATGCAGTTCAGAATGCTCTCCTGTTAAATGAATCAGAGTTGCATGGTCGACAACTGAAGGTGTCTGCCAAGCGAACTAATATTCCTGGAATGAAGCAGTATTATGGAAGAAGACCAACTGGTTTTCGATCTAGGAGGCCTTTCATGCCTGGTCCATTCTTTCCACCATATGTGTTAGAATTCATTACATGCTACTTACCGAAGTCGGTTCTTAAAGCTTGCTTGAAGTGTATTTACAATTATTGCGTGGCATATCCAAACACAGGAAATTGGGTTAAAAGAAAATGA | 771 | 0.454 | GVGETKTKISWREKQLNRRRGMEQEEHEVYGADIPDDEVDMDADAEQQDDQLPPNHTTKELEDMKKRLKEIEEEASALREMQAKVEKEMGAVQDSSGPSATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKVSAKRTNIPGMKQYYGRRPTGFRSRRPFMPGPFFPPYVLEFITCYLPKSVLKACLKCIYNYCVAYPNTGNWVKRK | 256 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste4g00037 | 256 | MobiDBLite | consensus disorder prediction | 87 | 107 | - | - | |
Pste4g00037 | 256 | MobiDBLite | consensus disorder prediction | 30 | 47 | - | - | |
Pste4g00037 | 256 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 113 | 181 | IPR000504 | GO:0003723 | |
Pste4g00037 | 256 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 111 | 187 | IPR000504 | GO:0003723 | |
Pste4g00037 | 256 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
Pste4g00037 | 256 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Pste4g00037 | 256 | SMART | rrm1_1 | 112 | 183 | IPR000504 | GO:0003723 | |
Pste4g00037 | 256 | FunFam | Polyadenylate-binding protein 1 | 105 | 191 | - | - | |
Pste4g00037 | 256 | CDD | RRM_II_PABPs | 112 | 183 | - | - | |
Pste4g00037 | 256 | Coils | Coil | 61 | 88 | - | - | |
Pste4g00037 | 256 | SUPERFAMILY | RNA-binding domain, RBD | 99 | 212 | IPR035979 | GO:0003676 | |
Pste4g00037 | 256 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H | 26 | 205 | - | - | |
Pste4g00037 | 256 | Gene3D | - | 32 | 191 | IPR012677 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste4g00037 | Pste-Chr4 | 396389 | 401549 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste4g00037 | 112 | 183 | Eukaryotic Initiation Factors Gene Family | AT2G36660 | 38.158 | 2.27e-09 | 55.5 |