LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste4g00034	ATTTTCTTTCTCTCTCCCTCATTCGAAACAAAACAAAACAACACAACCGGAGAACAAATCACTCTCTCCATCTCCTTCAGGTCCGCCGTTGTTTTCCGCCATACCCGCCATCGTTCCGCGGTGAGTTGTGGCGGCGCACATCTCCTATGGGAAAGTACATGAAGAAAGCGAAGCCCAAGGGGGAACTCGCCCTAGTGGAATCCACCACCAGCAACACCACCACCTCGTACATGGGGGTTCGAACACGCGCGAAAACCCTAGCGCTTCAGAAATCGCACGCTCAGACTGAACTCGCTGCTCCCACCTCCGATTCTTACCTTCAGCTTCGTAGCCGTCGCCTCCAGAAGCCTCCCATTTTGCTTCATTCTCCCAAGCGCCCTAAACACCCCAACCCTAAATCCCCAATCCCAGACCCTCCCAGGCTCGGCCTCGCTTCGGACCGCGATACTGCTCGCAACCACAACCAGGATAACGCTCTGCATGAGAATGCTGAGGTTCAGGAAGCCTCCTTCGGGGAGAATGTTTTGGATTTTGAAGGTAGAGAGAGAAGCACTAGGGAATCCACACCTTGCAGTTTGATAAGGGACTCAGATACTGTCAGGACTCCGGGATCAACTACCAGGCCTACTTGCTCAACTGAAGCTAATCGAAGAAGAACAGAGCATGCAACTAGAAGACAAATGCCAACTTCACGAGAAATGGATGAATTCTTTGCTGAAATTGAAGAGGCTCAGCAAAGGAACTTCATTGAGAAGTACAACTTCGATCCTGTCAATGAGAAGCCACTCCCTGGTCGTTTTGAATGGGAAAAGTTGAAACCCTAGAAGATTAATGTAGTGTTCCATCAAGAAATCTTACAAGTAGCAGGGTAGAATTTGTTGAAGCGGTGATGTCTTTATTTCCCTTTTCCATCACCTTCTATTTACTTGTAAAGAAAGTAGGACTCTTAAACTGTGTAGACTAATGGTCTGTAACTTTACAGAGGTGATGATTACACAACAATACAAATCAAAGTCCTTTGTCTAACAGATCATTTTAAGGGGGCAAGAAAAGGGGCTGTAGCGCCTAGGAGGATTAGGGATAAGTCAAAATTAGGTCAGTATGAGGTACAGGAATTTACTTAGGTTTTCTCTTGTTCTTGTATTTTACTCATCTTTGTCTATACTTGTACTGATGGAACTTGAACAAACTTTTAGAAATAAAGACCCGATTTCCCC	1217	0.461	MGKYMKKAKPKGELALVESTTSNTTTSYMGVRTRAKTLALQKSHAQTELAAPTSDSYLQLRSRRLQKPPILLHSPKRPKHPNPKSPIPDPPRLGLASDRDTARNHNQDNALHENAEVQEASFGENVLDFEGRERSTRESTPCSLIRDSDTVRTPGSTTRPTCSTEANRRRTEHATRRQMPTSREMDEFFAEIEEAQQRNFIEKYNFDPVNEKPLPGRFEWEKLKP	225

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	126	140	-	-
	Pste4g00034	225	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED	1	224	IPR044275	GO:0004861\|GO:0045736\|GO:0051726
	Pste4g00034	225	PIRSF	CKI_KRP_plant	1	225	IPR044275	GO:0004861\|GO:0045736\|GO:0051726
	Pste4g00034	225	Pfam	Cyclin-dependent kinase inhibitor	179	223	IPR003175	GO:0004861\|GO:0005634\|GO:0051726
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	141	164	-	-
	Pste4g00034	225	Gene3D	p27	164	225	IPR044898	-
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	96	112	-	-
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	67	186	-	-
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	16	30	-	-
	Pste4g00034	225	MobiDBLite	consensus disorder prediction	165	186	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste4g00034	Pste-Chr4	347040	349744	Dispersed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste4g00034	1	225	Core Cell Cycle Gene Families	AT5G48820	42.629	5.94e-50	161

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