Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00028 TCTAGTCCTCTTGAACGGAAACGCGGTGCTTCGGACTGGGTGTGGTTGAAGAAGTGATAGTGTGAAAGAAAGTGGGAAGACAAAGTTGTACGCGGAACAGAGATAGTATTTTATTTTCTGCCATCAAGAAAACTAAGAGAAAATTGTAAGATGAGGAGGCTTTGATCGATTGCGTGTGATTTGGAATGGGTTGTTTTTCGTGTTTCGATTCGCGGGAGGACGAGAAGCTGAATACGAATCCTGAGCAGGAAAACCATCATGAACATGAACATGAACATGAGCATGATGATGATCTTAAGCCCCCAGTCCCCTCTCGTATTTCCAGATTGCCCTCTGCCTCTGGAAGGTCAACATTAACAAGTAATGGTGATTCCAAGAGGGAGTTGGGTAATCTCAAGGACGGAGCCGCTGTCCAAATTGCCGCTCAAATATTCACTTTCCGTGAGCTTGCAGCCGCTACAAAAAACTTCAGGCCCCAGTCCTTTTTGGGGGAAGGTGGTTTCGGAAGGGTCTACAAGGGCCGCCTTGAAACCACCGGTCAGGTTGTGGCTGTTAAACAGTTGGACAGAAATGGTCTTCAGGGTAATCGGGAATTCCTTGTGGAGGTTCTCATGCTCAGTCTTCTACACCACCCTAATCTTGTGAATCTCATTGGATACTGTGCGGATGGGGACCAACGCCTCTTAGTTTATGAATTTATGCCATTGGGATCTTTGGAAGACCACCTTCATGATCTTCCCCCTGATAAAGAACCATTAGATTGGAACACCAGGATGAAAATAGCTGCTGGGGCAGCAAAAGGATTGGAATACCTTCATGACAAAGCAAATCCTCCAGTCATTTATAGAGACTTCAAATCGTCCAATATATTACTTGATGAAGGTTATCATCCAAAGCTTTCAGACTTTGGTCTTGCAAAGCTTGGTCCAGTTGGTGACAAATCACATGTTTCCACCCGTGTCATGGGAACCTATGGTTACTGTGCCCCAGAATATGCTATGACTGGACAGCTGACTGTGAAGTCTGATGTATATAGTTTTGGAGTAGTCTTCTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACCCGACCTCAAGGAGAACAAAACCTTGTCACATGGGCACGTCCACTGTTCAATGACCGCAGGAAGTTTCCAAAGTTAGCAGATCCACAGTTACAGGGAAGGTATCCCATGCGTGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCATTCAAGAACAGGCTGCAGCACGACCTCTCATTGGGGACGTGGTGACAGCCCTTTCCTTTCTAGCCAACCAGGCATATGACCAGAGGGGAGCTGGTGATGATAAAAGGAACAGAGATGATAAAGGTGGAAGAATATTGAAAAATGATGAAGGTGGAGGATCTGGACGCAGATGGGATTTGGAAGGTTCTGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATGTTACACAACAGGGATCTTGATAGAGAACGTGCCGTGGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGAGAAAAGAGACGACAGAATGCTCAGGGCAGTTTTGATGGTTCTAACGCCTAATCTGCGTAGTACACAATTCCCATCACCATCTTCTAATGCGAGGTGGAACTATGTGGGAGGTCATCTTATATAAAGCTGGTTTAGAACAAGTCTGAAAGGCCGTTTTGGCCATTGACCCGGTTTTACTTTGCTTTGAATATGTTTTGCGGCCATTTCGTGCACTGGCTGCAAGCAAACATAATGAACCGGGTACCAAAATCTTTTATAAATCAGCCTTGTTATGCACTTAGTTTTCTTTCATGTATTTTCATTTACCTCTTGCACGAGCGTATTGGAGTTGGAGAATGTACATCATTTGTTAGAACTAGGAGATCAAGGTTATTTAAGGACCAACACTTCTTGAAAATGCTGCAAGGACAAAAATGCTTGTTCCAACTCATTTAGGTTTTTTCTAGTTAAAATGCTAAAATCCAAGATTCTTTGTAATGTCTTCCTGGTAATCTCAGCTAAGGCAATAAATTAACGTAACTAAACTGCAA 2062 0.4442 MGCFSCFDSREDEKLNTNPEQENHHEHEHEHEHDDDLKPPVPSRISRLPSASGRSTLTSNGDSKRELGNLKDGAAVQIAAQIFTFRELAAATKNFRPQSFLGEGGFGRVYKGRLETTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLDEGYHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPQGEQNLVTWARPLFNDRRKFPKLADPQLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSFLANQAYDQRGAGDDKRNRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARMLHNRDLDRERAVAEAKMWGENWREKRRQNAQGSFDGSNA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00028 465 MobiDBLite consensus disorder prediction 380 456 - -
Pste4g00028 465 PANTHER OS07G0668900 PROTEIN 3 380 - -
Pste4g00028 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Pste4g00028 465 ProSitePatterns Protein kinases ATP-binding region signature. 101 124 IPR017441 GO:0005524
Pste4g00028 465 MobiDBLite consensus disorder prediction 1 66 - -
Pste4g00028 465 CDD STKc_IRAK 101 369 - -
Pste4g00028 465 SUPERFAMILY Protein kinase-like (PK-like) 77 371 IPR011009 -
Pste4g00028 465 MobiDBLite consensus disorder prediction 48 64 - -
Pste4g00028 465 Gene3D Transferase(Phosphotransferase) domain 1 172 393 - -
Pste4g00028 465 FunFam Serine/threonine-protein kinase PBS1 172 387 - -
Pste4g00028 465 Gene3D Phosphorylase Kinase; domain 1 80 171 - -
Pste4g00028 465 FunFam Serine/threonine-protein kinase PBS1 69 171 - -
Pste4g00028 465 MobiDBLite consensus disorder prediction 380 465 - -
Pste4g00028 465 ProSiteProfiles Protein kinase domain profile. 95 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00028 465 MobiDBLite consensus disorder prediction 7 41 - -
Pste4g00028 465 Pfam Protein kinase domain 98 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00028 Pste-Chr4 290630 297343 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00028 1 453 Glycoside Hydrolase AT3G07070 56.733 8.60e-174 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pste4g00028 Pkinase 2.6e-45 CL0016