Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00014 AACAAATAGAATCAGACGCAAAGGAAAACCAAATCCCTCTTCTCTGTCCTCTCCATTTCTGTGCCAGTTGGTGCTTAATTACGGAGAAAGATGAGCTGACCCTCTATCTTAAACGGCAGGGCGTAACGGACATCCAAAAAAAGGAGTCACGTGCCGAAGAAAAAGGGAAAAAGGTGGGATGGCTTTAGAGCAGGTATTATCGCTGGGTCAGAATACGAGTACAAATAGGAACCCGAACCCAGTAGATGGAAACACAAACGGCGTGGATGGTAGGGGAGAGGGTGGAGATGAGGGAGGGAAAGCACCTAGACTGCCTCGGTGGACAAGACAAGAAATACTGGTTCTGATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGTCGAACTGCGGGATTGGCATTCGGGTCGGGTCAAGTAGAGCCAAAATGGGCATCGGTGTCTTCGTACTGCAGAAAGCATGGAGTGAACAGAGGTCCAGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATAAGGGAGGAGACGGAATCTTTTTGGGTCATGAGAAACGATTTAAGGAGAGAGAGGAAATTGCCCGGATTTTTCGACAAGGAGGTCTATGATATTCTTGATTCGGGCTCGCAGGCGCCAGCGTTGGCTCTGGTTCTTTCGTCGCCTCTTCCAACCACAGTAACGGCTGCCAAAAGACTTCCGGATCCCGACCCTGTCCCTGTCCCTGTCCCTGTCCCTGACCCTGACCCTGACGAGCCCGAGGAGCCTCACCTCTACGATACTAATCGGAGCGCACCTGGTGAGGATGGCTTGTTCTCAGATTTTGAACAAGATGAAGTCGCTGCTACTCCTGAGAAGAAGGACTTTTTGCCTCCCTCCAAGGACATTCCTGCCCCCGTTCCTATCTCAGTGCCATTGCTATTGCTGTCTCTTATAAACACTTCCAAACACCTTTTCCTTCTTGTTTTCTTCTGGTTTACAGAGAAGCAATATCAACCCCTCCTCCGTGGATGCCAAGGAGAAGGTGTGACTAACGAGAAACAATCTACTTCAAATCCTGAAATGGGTTCTACATCTCAAGGAGAGCGAAAAAGGAAGCGGTTAGCAACTGATGGAGAGGGGGAAGCTTTGCAATATCAACTAATTGATATCTTAGAAAGAAATGGCAAGATGTTAAGTGCCCAACTTGAAGCGCAAAATATAAATTTCCAGTTGGATCGTGAGCAGCGGAAAGACCATGCAAGCAATCTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCCGATAAATTATAGTGCAAGAGCAATCAGAAATCAGAATTCGGTGTACATAACAGTTGAAGTCCTGTTTATTACTGGTTTCTATTTTATCTGAGGATGTCTTCTAGAAGATGACTGTCGCATTTGTTCCCCGTCTGTTTTCCTTTCTGAATATGCCATATTTTTGTGGTCTATTACTGTCATTTAGGATTTTATACACACATTGGATTACTTCTCTCTCTCTTACTGTTATACTCTTACTGTTATATTAATAATATACATGAAGAGCTTATACGAATCTTCCCTGGGAGTTAAGTTGCTTCTGACTGTGTG 1639 0.4606 MALEQVLSLGQNTSTNRNPNPVDGNTNGVDGRGEGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLAFGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREETESFWVMRNDLRRERKLPGFFDKEVYDILDSGSQAPALALVLSSPLPTTVTAAKRLPDPDPVPVPVPVPDPDPDEPEEPHLYDTNRSAPGEDGLFSDFEQDEVAATPEKKDFLPPSKDIPAPVPISVPLLLLSLINTSKHLFLLVFFWFTEKQYQPLLRGCQGEGVTNEKQSTSNPEMGSTSQGERKRKRLATDGEGEALQYQLIDILERNGKMLSAQLEAQNINFQLDREQRKDHASNLVAVLDKLADALGRIADKL 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00014 387 MobiDBLite consensus disorder prediction 294 310 - -
Pste4g00014 387 Pfam Myb/SANT-like DNA-binding domain 47 136 IPR044822 -
Pste4g00014 387 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 20 387 - -
Pste4g00014 387 MobiDBLite consensus disorder prediction 1 45 - -
Pste4g00014 387 ProSiteProfiles Myb-like domain profile. 47 113 IPR001005 -
Pste4g00014 387 Gene3D - 48 118 - -
Pste4g00014 387 MobiDBLite consensus disorder prediction 1 25 - -
Pste4g00014 387 MobiDBLite consensus disorder prediction 294 322 - -
Pste4g00014 387 CDD GT1 46 120 - -
Pste4g00014 387 MobiDBLite consensus disorder prediction 181 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00014 Pste-Chr4 94876 99203 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00014 31 144 Trihelix Transcription Factor Family AT1G13450 31.897 4.44e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pste4g00014 Myb_DNA-bind_4 1.5e-12 CL0123