Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04173 AAGCAAACGCATCCCACACCCATCATCATCACAATTCGTCATTTCCATATAACCCGCACTCGTGTGTGTGTTTATGGAGATTATTGCCATTTTCTTTTGCATTTTCCTCTTCTTCTCGTCTCTTCTTTCGTATCCATTCATAAAGAAACACAAGAAACAAGAACACATAGCTAAGCCTAAGCTTCCCCCTGGCTCAATGGGTTGGCCTTACATAGGAGAGACCCTTCAACTCTATTCTCAAGACCCTAACATCTTCTTTGCTTCTAAGCAAAAAAGATATGGAGAAATTTTTAAGACACACATACTAGGTTGTCCATGTGTGATGTTGGCAAGTCCTGAGGCTGCACGTTTTGTGTTGGTGACTCATGCTCACTTGTTCAAGCCAACATACCCGAAAAGCAAAGAGAAGCTGATAGGCCCTTCAGCATTGTTCTTTCACCAAGGGGAATACCACACTCGCATCAGGAAGCTGGTGCAAACCTCTCTCTCTCCTGAAACCATTCGAAAACTGATTCCAGACATCGAAACCGAGGTCGTTTCCTCCTTGGAATCGTGGGTTTACGCTGGACAAGTCTTTAACGCTTTCCAAGAAATGAAAAAGGCAAGGAGGAGAATCAGAGCGATTATAAGTGAGATCATTTGTAAAAGAAAGGAGCAGAGATTGTTGGAGAGGGATCTATTAGGCCACTTGCTGAACTACAAGGATGAAAAAGGACAAACGCTAAGTGATGACCAAATAGCTGATAATGTGATTGGGGTACTGTTTGCAGCTCAGGATACTACAGCAAGTGTTCTAACCTGGATTCTCAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCAATAAAAGCAGAGCAAATGGCAGTATATGAAGCTAATGAAGGAGGGAAGATGCCATTGACATGGGGTCAGACCAGAAATATGCCAATTACTCATAGGGTGATTTTGGAAAGCCTTAGGATGGCAAGTATCATATCATTTACTTTTAGAGAAGCTGTGGTTGATGTAGTATACAAAGGATATCTTATACCAAAGGGTTGGAAAGTCATGCCACTGTTCAGGAACATCCATCATAATCCAGAATTCCACTCTTCTCCTCACAATTTTGATACATCAAGGTTTGAGGTTGCACCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCTTGCCCCGGAAATGAGCTTGCCAAATTGAACATGTTCATTTTAATTCATCATCTAGTAACCAAATACAGGTGGGAAGTAGTGGGATATCAGAATGGAATCCAATATAGCCCATTCCCAGTACCTCTGCATGGTCTACCTACAAGATTTTGGAGAAACGAATAGAATCGAAGATGATCATATGATAAAATCTTCCGTTATTCACTATATAAAATTTTTAGATATTCCTTGCCACCCCGACTTGATATTGATTGCTCATCTTTAACCCAACCCAACCTCCTATTTTAAAGTGAGGATCCAAAAATTGGTCTCTTCTTGCAAGTAACATGATATGTCTATCCTATTTGTAAATGGTGGCAGTGGCATATCTTATTACCATTAATTAGCCTAAGCGTGTAAACTTTACTAATAATAGTTGTTATCAACTAATGATTTTAGTTCTTATCTTATTGAATGGCAGTGGCAGTGGCATATCTTATTGAATGGTTCCATCATATAAGTGTATAATCTTTGTAAGTCGAAGACTTGTATCGGATTCCAGTTATTAATTTCATTGAGAC 1734 0.3973 MEIIAIFFCIFLFFSSLLSYPFIKKHKKQEHIAKPKLPPGSMGWPYIGETLQLYSQDPNIFFASKQKRYGEIFKTHILGCPCVMLASPEAARFVLVTHAHLFKPTYPKSKEKLIGPSALFFHQGEYHTRIRKLVQTSLSPETIRKLIPDIETEVVSSLESWVYAGQVFNAFQEMKKARRRIRAIISEIICKRKEQRLLERDLLGHLLNYKDEKGQTLSDDQIADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVYEANEGGKMPLTWGQTRNMPITHRVILESLRMASIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFHSSPHNFDTSRFEVAPKPNTFMPFGNGVHSCPGNELAKLNMFILIHHLVTKYRWEVVGYQNGIQYSPFPVPLHGLPTRFWRNE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04173 421 Gene3D Cytochrome P450 26 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PANTHER CYTOCHROME P450 26 170 407 - -
Pste3g04173 421 PRINTS P450 superfamily signature 360 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS P450 superfamily signature 232 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 Pfam Cytochrome P450 170 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 Pfam Cytochrome P450 38 159 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 362 371 IPR017972 GO:0005506|GO:0016705
Pste3g04173 421 PRINTS E-class P450 group I signature 359 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS E-class P450 group I signature 369 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS E-class P450 group I signature 328 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 PRINTS E-class P450 group I signature 288 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste3g04173 421 SUPERFAMILY Cytochrome P450 33 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04173 Pste-Chr3 38743174 38746400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04173 12 420 Cytochrome P450 AT3G19270 64.924 0.0 604