Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04169 GATACTCCCACTCCCAGTGAGCAAGGCTCTCCTTAAAACCCGAGTCGTGTCAAGCGGCACAAGACACTTGTCGACTCCACCATACTCCCCAATCTCAAGATCGCTGCACACTAACCCAAGATCTAAATGTAAGGAAACCATCCCAATTAAAGCATGGTGACTGAAAATACCACATGATCTACTTGGGCATGATTGCTACGTAAGACAAAAGTTTGCTGAAGTAATTTTTTACGTCTGCTTCAAGTGTTGGAAAGTGGGGTCAAAGATGAACTTCAGGAACTACGGTGATAACCCCACTTGGGATGCCATGCATGGGAATACACCAGCAAATGTTACTCTGATGAGACAATCCTCAATATACTCCCTTACATTTGATGAGTTTCAAAGCACCATGACTGGGAAGGATTTTGGGTCCATGAACATGGATGAACTCTTGAAAAACATTTGGACAGCTGAAGAGACTCAAGCCTTAGCATTTTCAGCTGGTGCAGGTGGGGAAGGCCATAATAACCCAATTAGTGGTGGTTTGCAAAGGCAAGGTTCTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTTGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGGGCCAATGATGGAAGTGGTAATGGTGGTTCATCCATGCATAAAAGGCAACCAACACTGGGAGAAATGACTTTGGAGGAGTTTTTGGTGAGAGCTGGGGTTGTTAGAGAAGATGTGCCTCAACAACAACATCAAATTGGAAAACCAAATAACAATGGGTGGTTTGGTGACTTTCCTAGACCAAACAACAACACTGGCCTACTTCTTGGCTTCCAACAACCAAATAGAAGTAATGGGAATTTGAGTGAGAGGGTGGTGGAGAACAATAATAACTTAGTTCCCAAACAACCTCCCCCTTTATCACTAAACTCAAAGCACTCTCAAAGACAAACACAACAGCCACCACCACTTTTTCCAAAACCAGCAAATGTAGCCTTTGCTGGTCCTGTACATTTGTTGAACAGTGCTCAACTTGCAAGTCCTGGCAGAAGGGGAGGGTTGATTGGAGTTGCTGACCATTCAATGAATGTTGGAATTGTCGGTTTAGCCACAGCTCCTGGTGCTTCTCCCTCAAGGAAAATATCACCTAATGTAATTACAAGAAATAATGTAGATACCTCTTCAATGTCACCGGTTCATTATGCAATGAACAGGGGAAGGAAATGCAGTACTATAGAGAAAGTGGTTGAAAGAAGACACAGAAGAATGATAAAAAATAGAGAATCAGCTGCAAGGTCACGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTCAAGGAATTAAACAGAGAATTACAAAGAAAACAGGCAGAAATTATGGAAATGGAGAAGAATAAGGATTTGGACCCTGCATGTCGACCACGGGTAAGTAAAATACAATGCTTGAGAAGGACACTTACAGGACCGTGGTAGAGTCTTTGAATCTGAATACAGCTATACGAAGGAAGCCATTGTTATGTCATAAGAACTAGAGTATGTATGTGAGCCATGAGGAAATTGCAGTCCAACAGTAGCTATTATTAGTTAGTGTTATCTATAGGAACTAGGAGTGTTCAGTTGTACATTAATATCTTTGAATAATAAACTATTATATATGCTTGAATGCAATTTTCTTTTCTCTTCCAGGATGATATGATAACACAAGCTTATTGGACTGTATCTAACTTTTTT 1744 0.4146 MNFRNYGDNPTWDAMHGNTPANVTLMRQSSIYSLTFDEFQSTMTGKDFGSMNMDELLKNIWTAEETQALAFSAGAGGEGHNNPISGGLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGANDGSGNGGSSMHKRQPTLGEMTLEEFLVRAGVVREDVPQQQHQIGKPNNNGWFGDFPRPNNNTGLLLGFQQPNRSNGNLSERVVENNNNLVPKQPPPLSLNSKHSQRQTQQPPPLFPKPANVAFAGPVHLLNSAQLASPGRRGGLIGVADHSMNVGIVGLATAPGASPSRKISPNVITRNNVDTSSMSPVHYAMNRGRKCSTIEKVVERRHRRMIKNRESAARSRARKQAYTFELEAEVAKLKELNRELQRKQAEIMEMEKNKDLDPACRPRVSKIQCLRRTLTGPW 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04169 406 SMART brlzneu 324 382 IPR004827 GO:0003700|GO:0006355
Pste3g04169 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 377 IPR004827 GO:0003700|GO:0006355
Pste3g04169 406 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 406 IPR043452 GO:0003700|GO:0045893
Pste3g04169 406 MobiDBLite consensus disorder prediction 157 239 - -
Pste3g04169 406 MobiDBLite consensus disorder prediction 182 230 - -
Pste3g04169 406 Gene3D - 326 383 - -
Pste3g04169 406 MobiDBLite consensus disorder prediction 114 136 - -
Pste3g04169 406 MobiDBLite consensus disorder prediction 121 135 - -
Pste3g04169 406 Pfam bZIP transcription factor 328 379 IPR004827 GO:0003700|GO:0006355
Pste3g04169 406 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 326 383 - -
Pste3g04169 406 CDD bZIP_plant_BZIP46 328 382 - -
Pste3g04169 406 SUPERFAMILY Leucine zipper domain 328 376 IPR046347 GO:0003700|GO:0006355
Pste3g04169 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Pste3g04169 406 Coils Coil 347 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04169 Pste-Chr3 38608614 38612516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04169 25 406 bZIP Transcription Factor Family AT1G49720 48.775 2.36e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste3g04169 bZIP_1 4.9e-11 CL0018