Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04150 ATGTCTGACCATGAATATTTGTCTCAGCCTGGTTTTGGGTATCAACAACAACTTGTGCCTGGGATGAGGCCAGGTGCACCTCCTGTGCCAAATTTCTTTGTGCCAATGGTTCAGCAGGGACAACAAGGACAGCGTCCTGGTGGAAGGCGTGCAGGTGCAGTCCAGCAGTCACAGCAGGCTGTTCCAATGATGCCACAGCAGATGCTTCCTAGGGGGCGTGTCTATCGTTATCCTCCTGGTAGGGGTATGCCTGATGTTTCTATGCCTGGGGTTGCTGGAGGTATGTTTTCTGTTCCATATGACATGGGTAGTGGTATGCCGTTGCGTGATGCATCACTCTCCCAGCAAATTCCTATTGGGGCTTTGGCATCAGCTCTGGCTAATGCTTCTCCAGAGCAGCAGAGGACGATGCTTGGAGAGAATCTTTACCCCCTCGTGGAACAGTTAGAGCCTGATAATGCTGCCAAAGTGACAGGCATGCTTCTTGAGATGGACCAGACTGAAGTTCTGCATTTGCTCGAGTCGCCAGAAGCCCTGAAGGCAAAGGTAGCTGAGGCAATGGACGTCCTAAGGAATGTTGCTCAGCAGCAGCAGGCTGGTGGTGCCGCTGATCAGCTGGCTTCATTATCACTTAATGACAACCTTGTTTCTTAAGGTTTATATTTTGGAGTTCCCTAGTGATGATGGATTGTTATTTTCGGCACTGGCTTTGATACAGTTTTCAGGTTGAGTCTGTTTCGCTAGATTAGACACTTTTGGTTTGTTATGGACCACCTTTTGGTTGAAGGATACTTCAACACTGATTTTAATCATGCCTTGCATTTGGTACATGGCATCATTTGTTGGTTGTTTATCTTTTGGTTCATGATTGAGTTTGATTTGCGTAAATAATGGGTTATCTGTGATCAGTGATCCAATGATTTGCGAATATATGAATCCTCGTCTCATTTCCTTCCTAGTTCCTGCTTGACTCATGATGGATAATTGATAACTTTTTGCCCCTTGTCTTGGAGGAGTGTGGGCCCGGGAC 1030 0.4689 MSDHEYLSQPGFGYQQQLVPGMRPGAPPVPNFFVPMVQQGQQGQRPGGRRAGAVQQSQQAVPMMPQQMLPRGRVYRYPPGRGMPDVSMPGVAGGMFSVPYDMGSGMPLRDASLSQQIPIGALASALANASPEQQRTMLGENLYPLVEQLEPDNAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRNVAQQQQAGGAADQLASLSLNDNLVS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04150 217 Gene3D - 114 197 - -
Pste3g04150 217 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UBR5 131 199 - -
Pste3g04150 217 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 118 195 IPR002004 GO:0003723
Pste3g04150 217 Pfam Poly-adenylate binding protein, unique domain 126 190 IPR002004 GO:0003723
Pste3g04150 217 SMART poly_2 130 193 IPR002004 GO:0003723
Pste3g04150 217 FunFam Polyadenylate-binding protein 114 196 - -
Pste3g04150 217 SUPERFAMILY PABC (PABP) domain 58 211 IPR036053 GO:0003723
Pste3g04150 217 MobiDBLite consensus disorder prediction 39 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04150 Pste-Chr3 37189906 37191157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04150 9 216 Eukaryotic Initiation Factors Gene Family AT1G49760 66.972 4.70e-76 239