LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g04143	AGAGGTTGGATGGTTAAAAAGGGAGACAAAAGTTCTAAATTATGCAAATTCCGATTCCAAGAGGCCTTCACTTTTCTGTTTTCTTTCGACAAACCAATAAAAATTCCACACAGAGTAATGGGAACCACCAACTCCATTTTCTTGGCATCCCTCTTACTATGCTCTTTGTTACTCCACGGAGTGGAATCAAAATCCGAATACCAAGAACAAAAAAGACAGACTCTGGAGACACCAACACCTTCACCTTCACCTTCACCTTATTATCAATACGCGTCACCACCTCCACCGCCGAGCCCACTTACGCGTTTGGAGAAAGCCAAAAGAGTGCTTCTGCGTTTCAAAACGCTCATCGACGACCCCGACTGTTTCACGCGCGACTGGACCGAGGACAAGAGCCCCTGCGACTTCAGGGGTGTACAGTGCGCCACGTATCCAAACACGGAAGAGTTAGCAGTATCCGGAGTTGATCTAAACGGCGCCAAACTCTCCGGTAAAGACGGTTGCCAGTTATCACTCACCGGCACTTTAGTTGACCTAATTCCCGAATTGACATTCTTCCACGTCAACTCCAACAACTTCACCGGTGACTTCCCCAACGCCGTCACGCAGTTTCCGTTTTTCTTCGAGCTCGATCTCAGCAACAACAAACTCGCGGGAAGGTTTCCAATGAACGTGATTCAATCCAAACAGCTGGTCTTCCTGGACCTCAGGTTCAACAACCTCACCGGACAAGTCCCCTCGGATATCTTCCAAAAGGACCTCGACGTCATTTTCGTTAACAATAACAACTTCTCTAACTGCCTCCCCGGAAACTTCGGCTCCACAACCGCCAGATACCTAACTTTCGCCAACAACAAACTCTCCAACGCGCTTCCCAGGAGCCTGGGCTACGCTCCCAATCTCACCGAACTGCTTCTCTTGAACAACAACTTCCAAGGCTGCTTACCCTTCGAAATCGGCTACCTTAAAAAAGCCGTTGTCTTCGACGTCAGCAAAAACAACTTAACCGGTCCCATTCCACTCTCCTTTGGGTGCCTCAAGACCATTCAGTATCTCAACTTATCCCACAACAAACTCTACGGCGTCGTTCCCGACAACCTTTGCATGCTCCCCAGTCTCCGCAACAACGGCAACATTTCCTTAGCCAACAATTACTTCAAAGGAATCGGACCCTCCTGCTGGAGTTTGATTAAGTCCAAGGTTTTGGATGTTTCCGGTAACTGCATCCCGGGCCTCCCCAACCAAAAGTCGCCAAAACAATGCTATGATTTTTACTGCAACATCAAACCTTGTCCCGATCCAAATTCTTTTTACTTCCTTCCTTGTAAATATTACCATTGGGGGAATCAGAGTCCCAAAACGGGTCCACCCTCTCAGCCTGTCACTTACAAGGCTCTCTCGCCGCACCACCATTGCAAAATCCTTGAATGTCCATCACCACCACCGGATTCAACCCCACTAGTCCCTGCCATTTTGAACTTCATAGACCAAAGACTAGCTCTGGTCTTCCCAATTATTCAAACCTTCAAGAACATAATAACCTCAGACCCTCTTGGAGTAACAGCAACATGGGTTGGTCCAAACATTTGCAACTACACAGGCTTCTATTGTGACAACCCACCAGACAACCTCACTGCCACAACCATTGCCTCAATAGATTTCAATGGCTTTCAACTCACTGCCCCATCACTCGATGGCTTCATTGACCAACTCCCTGACCTGGCTCTTTTCCATGCAAACTCCAACAAATTTTCAGGCACCATTTCACCAAAAATAGCATCACTCAAATTCCTATACGAACTTGATCTAAGTAACAACTTGCTCTCTGGGGTTTTCCCCACATCGGTTATAAACATCCCCTCTTTGTCCTTTTTGGACATTAGGTACAACTTTTTCACCGGCACAGTTCCCCCACAAATTTTCATGCAAACATTAGATGTTCTTTTCCTCAACAACAACAATTTCATGCTAACACTTCCCAACAACCTAGGCAACACCCCAGTTTTCTATCTCACTTTAGCCAACAACAAATTCACAGGCCCCATTCCACGTACCATTGGCCAAGCCTCTTCCACTTTGATCGAAGTGTTACTATTGAACAACCTTTTAACTGGTTGTCTTCCCTACCAAATTGGGTTCTTGAAAAATGTGACATTGTTTGATGTTGGTGGGAATCTCTTAACTGGGCCAATACCATGGTCCTTTGGGTGCTTGAAGAAAGTGGAGCAGCTTAACCTAGCTAGGAACTTTTTCTATGGACAGGTTCCGGAAGTGGTGTGTGCATTGGAGAATTTGGCTAACCTTTCATTATCTTATAACTATTTTACCAAAGTGGGACCCTTGTGCATGAAGCTGATTCAAAAGGGGGTTCTTGATGTGAGGAAAAACTGTATTTTTGGCCTTCCTGATCAGAGATCAGGGAGGGAGTGCATGGCATTCTTTTTGATTCCAAAATCATGTCCTCACCCTTCGTTGTCGTTTAATATCATACCGTGTCAGATTCATCATTGGATGAAACCAAAAGAAAGAACTAAGAGGAATTTGCTGTCATATTCTGCTCTTTCTAGAAATAGAGTAGTTTTGTAA	2586	0.4551	RGWMVKKGDKSSKLCKFRFQEAFTFLFSFDKPIKIPHRVMGTTNSIFLASLLLCSLLLHGVESKSEYQEQKRQTLETPTPSPSPSPYYQYASPPPPPSPLTRLEKAKRVLLRFKTLIDDPDCFTRDWTEDKSPCDFRGVQCATYPNTEELAVSGVDLNGAKLSGKDGCQLSLTGTLVDLIPELTFFHVNSNNFTGDFPNAVTQFPFFFELDLSNNKLAGRFPMNVIQSKQLVFLDLRFNNLTGQVPSDIFQKDLDVIFVNNNNFSNCLPGNFGSTTARYLTFANNKLSNALPRSLGYAPNLTELLLLNNNFQGCLPFEIGYLKKAVVFDVSKNNLTGPIPLSFGCLKTIQYLNLSHNKLYGVVPDNLCMLPSLRNNGNISLANNYFKGIGPSCWSLIKSKVLDVSGNCIPGLPNQKSPKQCYDFYCNIKPCPDPNSFYFLPCKYYHWGNQSPKTGPPSQPVTYKALSPHHHCKILECPSPPPDSTPLVPAILNFIDQRLALVFPIIQTFKNIITSDPLGVTATWVGPNICNYTGFYCDNPPDNLTATTIASIDFNGFQLTAPSLDGFIDQLPDLALFHANSNKFSGTISPKIASLKFLYELDLSNNLLSGVFPTSVINIPSLSFLDIRYNFFTGTVPPQIFMQTLDVLFLNNNNFMLTLPNNLGNTPVFYLTLANNKFTGPIPRTIGQASSTLIEVLLLNNLLTGCLPYQIGFLKNVTLFDVGGNLLTGPIPWSFGCLKKVEQLNLARNFFYGQVPEVVCALENLANLSLSYNYFTKVGPLCMKLIQKGVLDVRKNCIFGLPDQRSGRECMAFFLIPKSCPHPSLSFNIIPCQIHHWMKPKERTKRNLLSYSALSRNRVVL	861

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g04143	861	Gene3D	Ribonuclease Inhibitor	103	276	IPR032675	-
	Pste3g04143	861	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	492	839	-	-
	Pste3g04143	861	MobiDBLite	consensus disorder prediction	68	101	-	-
	Pste3g04143	861	SUPERFAMILY	L domain-like	509	800	-	-
	Pste3g04143	861	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	150	421	-	-
	Pste3g04143	861	Gene3D	Ribonuclease Inhibitor	505	666	IPR032675	-
	Pste3g04143	861	SUPERFAMILY	L domain-like	106	409	-	-
	Pste3g04143	861	Gene3D	Ribonuclease Inhibitor	668	859	IPR032675	-
	Pste3g04143	861	Gene3D	Ribonuclease Inhibitor	277	426	IPR032675	-
	Pste3g04143	861	Pfam	Leucine rich repeat N-terminal domain	507	538	IPR013210	-
	Pste3g04143	861	Pfam	Leucine rich repeat N-terminal domain	106	141	IPR013210	-
	Pste3g04143	861	FunFam	LRR receptor-like serine/threonine-protein kinase GSO1	540	789	-	-
	Pste3g04143	861	MobiDBLite	consensus disorder prediction	79	101	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g04143	Pste-Chr3	36958842	36969463	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g04143	492	817	Leucine-rich Repeat extension Gene Families	AT3G24480	46.626	8.32e-91	294