Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04141 ATGATGGCAAGAACAAAGTCTATTTTTTTCTTCTTCTCCCTCTTGCTGATATTAGGAGTGGTGGCGGCACAAGAGGTGGCAAAATCTGAAAGCGAAGCATTGGGCAAAGAAGAAGAAGAGAAAAGAGAGACTCTGGAAATCATCATTGGCGGGGGAGGAGGCTCCCCTGCTCCTTCCCCGGAGTCTCCGTGTCCGCCGCCGCCTCCGAGCCGTTTGGAGAAAGCGAAAAGAGTGCTTTTGAGGTTCAAAACGCTCATCGACGACCCCAATTGTTACACGCAAACGTGGACACAGAACAGAAATGTTTGTGACTTCAGAGGGGTACGATGTGCTCCGTATCCAAACACAAAGGAGCCGGCAGTGGCTGGAGTCGACTTAAACGGCGCACGTGTCACCGGTCAAAACGGTTGCCCGTTGCCCGTGGAGGGGACTTTGGTTGACCAAATACCCGAATTGACCTTCTTCCACGTCAACTCCAACGGCTTCGCCGGTGGCGTCCCCAAAGGCATCACAAAGTTTCCGTTTTTCTACGAGCTGGACCTCAGCAACAACCGAGTCACGGGCAATTTCCCCATCGACGCGATCACCGCCAAGACGCTGGTCTTCCTGGACCTCAGGTTTAACAGACTCACGGGATCAATTCCCGCCGAACTCTTCACCAAGGACCTTGACGTCATTTTCGTTAACAACAATCAGTTCACGCAGTCCCTCCCCGAAAATTTCGGCTCCACAACCGCCAGATACCTAACTTTCGCCAACAACAAACTCTCCGGCGCGCTTCCCAGGAGCGTGGGCTACGCGCCCAATCTCACGGAAGTGCTTTTCTTGAACAACAGCTTCCAAGGCTGCTTACCCTTCGAAATCGGGTACCTTAAAAAAGCCGTTGTGTTTGACGTTAGCAAAAACTCCTTAACCGGTCCGATTCCACTCTCCTTTGGGTGCCTCAAGAGCATTCGGTATCTCAACCTAGAGCAGAACAAATTCTACGGCGTCGTTCCCGACAACCTTTGCATGCTCCCCAGTCTCCGCAACAACGGCAACATTTCCTTAGCCGACAATTACTTCAAGGAAATCGGACCCTCCTGCTGGAGTTTGATTAAGTCCAAGGTTTTGGATGTTTCTAGAAACTGCATCCCGGGGCTCCCCAACCAAAAATCACCGAAAGAATGCTATGATTTTTACTGCAAGATCAAAGCATGCCCAAATCCAAATTCTCTTTACTACGTTCCTTGCAAATCTCACTGGGGGAATAATCAGAGTCCCAAAACGGGTCCACCCTCTGCTCCTGTCACTTACAACACTCTCAAACCGCACCGTTTGAGATTGTGA 1329 0.5079 MMARTKSIFFFFSLLLILGVVAAQEVAKSESEALGKEEEEKRETLEIIIGGGGGSPAPSPESPCPPPPPSRLEKAKRVLLRFKTLIDDPNCYTQTWTQNRNVCDFRGVRCAPYPNTKEPAVAGVDLNGARVTGQNGCPLPVEGTLVDQIPELTFFHVNSNGFAGGVPKGITKFPFFYELDLSNNRVTGNFPIDAITAKTLVFLDLRFNRLTGSIPAELFTKDLDVIFVNNNQFTQSLPENFGSTTARYLTFANNKLSGALPRSVGYAPNLTEVLFLNNSFQGCLPFEIGYLKKAVVFDVSKNSLTGPIPLSFGCLKSIRYLNLEQNKFYGVVPDNLCMLPSLRNNGNISLADNYFKEIGPSCWSLIKSKVLDVSRNCIPGLPNQKSPKECYDFYCKIKACPNPNSLYYVPCKSHWGNNQSPKTGPPSAPVTYNTLKPHRLRL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04141 442 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 9 421 - -
Pste3g04141 442 Gene3D Ribonuclease Inhibitor 72 245 IPR032675 -
Pste3g04141 442 MobiDBLite consensus disorder prediction 48 70 - -
Pste3g04141 442 Pfam Leucine rich repeat N-terminal domain 75 110 IPR013210 -
Pste3g04141 442 SUPERFAMILY L domain-like 74 378 - -
Pste3g04141 442 Gene3D Ribonuclease Inhibitor 246 399 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04141 Pste-Chr3 36929552 36930880 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04141 71 396 Leucine-rich Repeat extension Gene Families AT4G13340 42.683 1.61e-76 251