Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04127 AAACTATCAGCGATATTCTAAACATAGCAACTCATCCCCCCCAAAAGAAAGGAATGCATGACGGGAAAAAGGAAAGAAAAGAAGTCCCAGTAAACATCGAACCCGATAGTGGCTTTTGCAGTTCCCCTGAGGTAGTTCAAGCTATCCAAAAGGTAATAGCAGAGTTGATAGGGACATATTTCTTAATATTTGCAGGGTGTTGCTCCGTAGTTCTTAATAATGCAGAAAAGACTAAAGGGACAGTAACTTTCCCTGGAGTATGTTTGGTGTGGGGTTTTTCAGTAACCATCATGGTTTATTCTCTCGCTCATGTCTCTGGTGCTCATTTCAATCCAGCAGTGCCTTTCTATATTATTGCTCAAGTACTAGGATCTATCCTTGCTAGTGGGACATTGTACCTTCTTTTTGAAATAGATGATAATTCTTATTTTGGAACAAAACCAGCAGGAACTCCAATTCAATCTTTTATTTTTGAGATAATCACATCATGTCTCTTGATGTTTGTTGTCTCTGCAGTTTCCACAGACAATAGAGCAATTGGAAAATTGGGAGGGATTGCTGTTGGTATGACAATCACAGTAGATGTTTTCATTGCTGGACCTGTGTCAGGAGCATCGATGAACCCAGCAAGAACCTTTGGACCTGCATTGGTGTTGCACGTTTACAGTGGATTTTGGGCTTATGTAGTTGGACCATTAGTTGGTGCTTTACTAGGCGCCACATGCTACAACTTGATTAGATATACTGATAAACCACTTAGAGAAATTGGCACAAGCTCAAAAATATTTAAAATTGCATCCAGCAGACCAAGTTTTAGA 818 0.3973 MHDGKKERKEVPVNIEPDSGFCSSPEVVQAIQKVIAELIGTYFLIFAGCCSVVLNNAEKTKGTVTFPGVCLVWGFSVTIMVYSLAHVSGAHFNPAVPFYIIAQVLGSILASGTLYLLFEIDDNSYFGTKPAGTPIQSFIFEIITSCLLMFVVSAVSTDNRAIGKLGGIAVGMTITVDVFIAGPVSGASMNPARTFGPALVLHVYSGFWAYVVGPLVGALLGATCYNLIRYTDKPLREIGTSSKIFKIASSRPSFR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04127 255 SUPERFAMILY Aquaporin-like 30 236 IPR023271 -
Pste3g04127 255 PANTHER AQUAPORIN NIP2-1 18 237 IPR034294 -
Pste3g04127 255 Pfam Major intrinsic protein 28 225 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g04127 255 Gene3D Glycerol uptake facilitator protein. 18 239 IPR023271 -
Pste3g04127 255 PRINTS Major intrinsic protein family signature 208 228 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g04127 255 PRINTS Major intrinsic protein family signature 32 51 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g04127 255 PRINTS Major intrinsic protein family signature 73 97 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g04127 255 PRINTS Major intrinsic protein family signature 171 193 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pste3g04127 255 PRINTS Major intrinsic protein family signature 140 158 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04127 Pste-Chr3 36674608 36679479 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04127 2 255 Major Intrinsic Protein MIP AT5G37810 49.821 7.64e-91 268