Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04077 ACTGAATGTGAACTAATTGAGGAGATTATCAAAGATGTTATGCAAAAGCTGAATCATACATATCCAACTGAAGTAAAAGAAGCGCTTGGAACTGAGGCAGTTGAAGGCATAGTCTTAGATGTGTCTCAAATAGAAATCTTGCTCTTGAGTTATGAGACTTTCTCAAGGATGATCAATATAAGATTTCTCAAATTCTATATGGAGAGGGGTAGGACTTGCAATTTGCACCTTCCTTCAGGTCTCAAATCATTGCCTAATAAATTAATTTACCTACAATGGGATGGATACCCTTCCAAGTCTTTGCCATCAACTTTTTGTCCTGACAACCTTGTTGTGCTTTCTATGGTGGAAAGCCATGTTGAAAAACTTTGGGATGGAATCAAGAGTCTTGCAAGCTTGAAAGAGATCAACCTCCGAGCCAGCAAAAACTTAATGATTCTCCCAGATTTATCTCTAGCACCAAATATTGAAACCATAGATGTTTCTCATTGCACAAGTCTGCTTCAGGTTCCCTTATCCATCCAATGTGTCAAGAAGCTTCTTTTGTTTAACTTGGAATCCTGCAAAAGTCTTAAGAGTCTTCCAAGAAACATTCACTTAACTTCTCTTGAAATGTTCATTCTCAGACGCTGTTCAAGTCTTTATGAGTTTTCAATGACTTCAGAAAATATGACACGCCTAGACTTGAGAGAAACAGCAATAACAGATTTCCCAGAATTAGTTTGGCAGCACTTGAACAAGCTTGTTTACTTGAATCTGGAATCCTGCAACAAGCTCAAGAGTCTTACAAGCAATCTTCACTTAAAATCTCTTCAAAGACTCAATCTGAGAGATTGTTCAAGCCTTGAGGAGTTTTCTGTGACTTCAGAGAACATGGAATACTTGAATTTGAGAGGAACATCAATAAAAGAATTGCCAACAGCTATTTGGCGCAATGACAAGCTTTTTACTTTGGTTCTTCATTCATGTAAAAAACTTGTGAGTTTTCCTGACAGACCAAAATTTGAGGATTTGCCTCTCATCTTCAGTGCGGCATCCTCTTCTGAAAGGCCAAATATGGAAGAACCATGGACTTTGTTATCCTTAGCAGATTTATCTCTAAAAGGAAGCAGTATTGAGAATTTACCTGTGAGCATCAAAGATCTTCCTAGTCTGAAAAAGCTTAACTTGACTGAGTGCAAGAAGCTTCGGACTTTACCAAGCCTTCCACCATCCTTGGAAGACTTGTCCTTAGATGAAAGTGATATTGAGTGTTTACCTGTAAGTATCAAAGATCTTTCTCATTTGAGAAAACTTACCCTAATTAACTACAAGAAGCTTTTGTATCCGCAGGATCTTCTATCATCTTTCAAAACTTCATTACTAAATGAAAGTAAAGTTGATTCCCATCTAGTGAGCATGAAAGGTCTTTCTCATCTACAGAAGTTTCCTTTGGTTAATTGGAAAAGGTTTCATTCTCTACCTGATCTTCCACCATTCTTGGAAGAATTTTCGCTAAGTGAAAGCAACATTGAGTGCATACCTGAAAGCATAAAAAAAATTTCTCATCTGAGAAAACTAGCCTTAACAAAGTGCACGAGGCTTCGGTGTTTACCAAAGCTTCCACCATCTTTGGAAGATTTGTTTGTAAGTGGATGTGATATTGAAAGCTTACCAATGAGCATTAAAGATCTTATTAATTTGCAAAAGATCACATTAATTGAGTGCAGGAAGCTCCAGGCTCTACCAGAGCTCCCACCATGCCTGCAATCATTTTGTGCAGCTGACTGCAGGTCACTAGAGATTGTTCAAAGTTCAAAGAGTGTCTTAATAGAAGATAGATATTCATTCTATTACAATTGCATAAACTTGGATCAAAATTCACGCAACAATATCATTGCAGATGCACCCTTTCATGCAGCTTATGCTTCTTTGCAAGAAGGAACACCTCTTGGTCCTCTTATTTCTATTTGTTTGCCAGGAACTGAAATCCCAGACTGGTTCAGCTACCAATCAACAAATTCTTCACTGGACATGGAAATTCCTCAACAGTGGTTCACTGATTCAAAGTTCTTAGGTTTTGCTTTGTGCCTTGTAATTGGTGGTTTCCAGCAAAACAGTTATGAAGAGTATGATCCAGATGTCAATTGTTATCACTTTGTGAAGTCTGCCTATAACTGTGACCCCAGTGTCCCCTTTCTGGGCCATTGCACAACTGTAATGCAGGTGCCAAGAGGTTTTAATTCAGATCATCTATTTATATGCTACTATCCTGCTTTTAATGCCTCCATTCTGCAAGATTTCAAGGATTTAAGCTTGTACTATGATGCCAACAACTTGAGGCTCAAAGTCATCTTTAAATTTAAGGGTCCATCTCAACGGTTGGACATTGTAAAGAAGTGCGGGGTCAGACCTCTGTTGATTGCTAATACTGAAAGGCTTCACAAAGAAAGCGAACTACAACCTGAATAA 2451 0.3819 TECELIEEIIKDVMQKLNHTYPTEVKEALGTEAVEGIVLDVSQIEILLLSYETFSRMINIRFLKFYMERGRTCNLHLPSGLKSLPNKLIYLQWDGYPSKSLPSTFCPDNLVVLSMVESHVEKLWDGIKSLASLKEINLRASKNLMILPDLSLAPNIETIDVSHCTSLLQVPLSIQCVKKLLLFNLESCKSLKSLPRNIHLTSLEMFILRRCSSLYEFSMTSENMTRLDLRETAITDFPELVWQHLNKLVYLNLESCNKLKSLTSNLHLKSLQRLNLRDCSSLEEFSVTSENMEYLNLRGTSIKELPTAIWRNDKLFTLVLHSCKKLVSFPDRPKFEDLPLIFSAASSSERPNMEEPWTLLSLADLSLKGSSIENLPVSIKDLPSLKKLNLTECKKLRTLPSLPPSLEDLSLDESDIECLPVSIKDLSHLRKLTLINYKKLLYPQDLLSSFKTSLLNESKVDSHLVSMKGLSHLQKFPLVNWKRFHSLPDLPPFLEEFSLSESNIECIPESIKKISHLRKLALTKCTRLRCLPKLPPSLEDLFVSGCDIESLPMSIKDLINLQKITLIECRKLQALPELPPCLQSFCAADCRSLEIVQSSKSVLIEDRYSFYYNCINLDQNSRNNIIADAPFHAAYASLQEGTPLGPLISICLPGTEIPDWFSYQSTNSSLDMEIPQQWFTDSKFLGFALCLVIGGFQQNSYEEYDPDVNCYHFVKSAYNCDPSVPFLGHCTTVMQVPRGFNSDHLFICYYPAFNASILQDFKDLSLYYDANNLRLKVIFKFKGPSQRLDIVKKCGVRPLLIANTERLHKESELQPE 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04077 816 FunFam Disease resistance protein RPS4 31 222 - -
Pste3g04077 816 SUPERFAMILY L domain-like 38 336 - -
Pste3g04077 816 Pfam C-JID domain 652 797 IPR045344 -
Pste3g04077 816 Gene3D Ribonuclease Inhibitor 29 222 IPR032675 -
Pste3g04077 816 Gene3D Ribonuclease Inhibitor 223 405 IPR032675 -
Pste3g04077 816 Gene3D Ribonuclease Inhibitor 406 602 IPR032675 -
Pste3g04077 816 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 459 600 - -
Pste3g04077 816 SUPERFAMILY L domain-like 255 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04077 Pste-Chr3 35689727 35693368 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04077 502 576 WRKY Transcription Factor Family AT4G12020 36.000 2.37e-06 49.7