Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04047 TCATGGAGTTGGAGGTGCTTCTGGTTGGAGGCATAGACTCCTGCTTCGTCTCCCTCCCTCTCTCTCTCATCCAAACTCTTCACTCCACGCGCTCCTCTCCGCTCCCTCTCCCACTCGCGCTCGAGCTTCGCTCTCCCCTTCGCTCCTGGTTCGTCGCTTGGTCCGGCGCCACCTCTTCCTCCTCTGCCGTAGAGGTTTCTCCTCAGTTCGCGGAGTGTGTTTCGCTGCCGAATCGCGCCGCTGTTCAGGTCAGAGCTGCTCCGAGTGTGCCGCACGCTACTCTGGTCACGATCGAACCGCACACCGAGGACGATTGGGAGATATTGGAGCTCAACGCGGACCAAGCTGAAGCCAAAATCCTCACTCAGGTCAGGATTGTCCATGAAGGGATGAGATTTCCTTTGTGGTTGCATGGTCATACTGTCATCACATTCCAAGTAGCTTCTGTTTTTCCGAAGAATGTGGTGGTACAACTCATGCCAGGAACTGAAGTTGCTGTTGCTCCAAAAAGACGTAAAAAAAGTTTGGATTCTGCTGGAGATTCACATCTAGACGCCTCTAGTAAACAGCATACTGCTAAGATGCTGCTTCGTTTACAAGATCCAGATGAATTGTGTAGTACCAGTACTCATATCAAAGGAGTTGATCTTAACACAGGGCTTACTTCTGTTGCATTTGTCCACCCAGAAACAGCCAAAAAATACTCATTCAACATGCTTCAGTTGGTTTTGATAGTACCCAGAGTATCCAAGGAGAATGTTAATATTTCCAGAACCAATATTATGAAAGCCAAAAGTGGTTCAGCTACCAATGAAGTTGAGAATGGATATACTGACAAGACAGAGTATCGACAAGCAATTGTTCAGCTATTGATTTCAGAATCTGTGGCTGAAGGACATGTGATGGTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTAGGGTATATTTGAAGCCATGCAATATTATTTTGGAAAAAAGTATTCCTTCCACCTATCTTTTCCCATGCCAATTCAAACTATTAAGGCAGGGGAATGCATTTGAGAAAGATGGTCTAGAAGATTTTCATGGCCACAAGAATCACATTGATGAAAAATTGCACCCAAAAGCTGCATCTGGTATTTTTGGGGATACCATAGATTGGTCAATCCAAAGTGAAGTTGTAGCAGCTCTCTCTGATGAATCCAATTTAAAAGCAGAGGAAGAGGCTACATATCAATCTCAGAATCAAAGGGGATTACAGAACCTTGTACGACTATGGTATATCACACAACTTAAGGCTATTACTTCCATTTCGGGTATGGAGGTTAGCTCATTGATTATGGGTAATAAAACCTTGCTTCATTTTGAAGTAAAGCTTGGGAGTACTGGGAAGGTTCAGTTAGCCAATTATTCTTCCAAGAACAGTGGCAAGACAGCTGAAATTTTGTTTTTAATGACCTTTGAAGAAGAACATCAGCATCATGGGAAACTTAATGCATATGAAGTTGCTTTGGGTGGAAAAATCAATAACGTCAATATACGTGATCTAAAGCTTTTTGAAAGGATGAAATTGTGTGATCCTGTCTATTTTCATTCTATTGAAGAAAGAGCATCCGAAGACCACATAAGTTCAAATTTATCTTCCCTTGGATGGATGGAGAAAACTGCAGATGATGTTATCAATAGGATGTTGATATTGTTATGCTCTGCATCTGGATTGTGGTTTGGCTCACACAAGTTACCACTTCCTGGACATGTTCTGATCCATGGACCTCCTGGCTCTGGGAAAACTATATTAGCAAGAACTGTGGCCAAATCCCTTGAGAATCGTGAGGACATCTTAGCACACATAGTTTTTGTTTCTTGTTCAAAACTTGCTCTGGAGAAGGTCCCAGTTATTCGCCAAGAACTTTCTAACCATGTAACTGAAGCTTTAAACCATGCTCCTTCTGTTGTCATCTTTGATGATCTTGATAGCATAATTTCTACCCCTGACACTGAAGGATCTCTGCCGTCAATGTCTGCTGCTGGACTCACAGATTTTCTGGTTGACATCATGGATGAATATGGGGAGAAGAGGCAAAAATCATGTGGATTTGGACCAGTAGCATTCATAGCTTCCATACAATCCTTAGAGAAGATACCACAATCTTTGAGCTCTTCAGGACGGTTTGACTTTCACATAAAGCTGCCTGCTCCTGCAGCCTCTGAGCGCAGGGCTATGTTGAAGCATGAAATACAGAGGCGTCACTTGCGATGCGATGATGACATCCTGCTAGATGTGGCTGCAAAATGTGATGGTTATGATGGTTATGATCTGGAAATATTAGTTGACAGAACTGTCCATGCTGCTGTTCGCCGTTTTCTGCCATCTTATGCTTCCATTTATGAGCACGAGAGTCCTGCTTTACTAAGGGAGGATTTCTCTCAGGCAATGCTTGATTTTCTCCCAGTTGCAATGCGTGATATCACAAAACCAGCTTCTGATGATGGCCGTTCTGGATGGGATGATGTGGGTGGTCTTGTTGACATTCGAAATGCTATTAAGGAGATGATAGAGTTGCCTTCAAAGTTTCCAAAAACTTTTGCAAAAGCACCTTTGAGGTTGCGGTCAAATGTCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATAGTTGGTGCTGCTGCTGCTGCTTCTTCACTTCGATTCATATCGGTGAAAGGGCCAGAGCTGTTAAACAAGTACATTGGTGCTTCTGAACAAGCTGTTAGGGATATATTCTCTAAAGCAGCTGCTGCATCGCCATGCCTACTTTTTTTTGATGAATTTGATTCTATTGCTCCCAAGAGAGGGCATGACAATACTGGAGTAACTGATCGTGTTGTTAATCAAATAATGAAAACAAATGGGAAAGGGATATTGATTGTTGGCTATCTGCTATTCTCATATATGTTTTTCATGTCAAGCAGTAGACCGGATTTACTTGATGCAGCACTCTTGAGACCTGGTAGGTTAGATCGTCTTCTATTCTGTGACTTTCCATCTAGGAATGAGAGATTGGAAATTCTTGCAGTACTTTCTCGAAAGTTACCGATGGCAAATGATATTGATTTGGCTACAATAGCTGATATGACTGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCGCAGCTTGCAGCAGTTCATGATGTTCTGGAAAATGTGGATACCTCTAGGTCAGAAAAAACACCGGTTATTACTGATGCTCTTCTGAAGTTCACAGCATCCAAGGCTAGACCATCTGTTTCAGAAGAAGAGAAGAGAAGACTCTACAATATATATGGCCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCCCAGTCAAGGGATACAAAAGGCAAGAGGGCAACTCTAGCTTGATAGTCAAGTAATACAGTGCAATTTGTTCATGTGATGGAAGCTGCTCTTTATTATTTCTTTCCCATGAAGATGTGTTCTCTGTTCATTTGCACTTCCTTAATAGTAAATTTGTATAGGAGCCGATTGTGGTTCAATTCATCATTTGTTGTATTTGATAATGTAAATTCTCCTAGCAGTAGTACGAATAAAATATGAAAAGAAACATGTTTCCGCAA 3592 0.4243 MELEVLLVGGIDSCFVSLPLSLIQTLHSTRSSPLPLPLALELRSPLRSWFVAWSGATSSSSAVEVSPQFAECVSLPNRAAVQVRAAPSVPHATLVTIEPHTEDDWEILELNADQAEAKILTQVRIVHEGMRFPLWLHGHTVITFQVASVFPKNVVVQLMPGTEVAVAPKRRKKSLDSAGDSHLDASSKQHTAKMLLRLQDPDELCSTSTHIKGVDLNTGLTSVAFVHPETAKKYSFNMLQLVLIVPRVSKENVNISRTNIMKAKSGSATNEVENGYTDKTEYRQAIVQLLISESVAEGHVMVAKSLRLYLRARVYLKPCNIILEKSIPSTYLFPCQFKLLRQGNAFEKDGLEDFHGHKNHIDEKLHPKAASGIFGDTIDWSIQSEVVAALSDESNLKAEEEATYQSQNQRGLQNLVRLWYITQLKAITSISGMEVSSLIMGNKTLLHFEVKLGSTGKVQLANYSSKNSGKTAEILFLMTFEEEHQHHGKLNAYEVALGGKINNVNIRDLKLFERMKLCDPVYFHSIEERASEDHISSNLSSLGWMEKTADDVINRMLILLCSASGLWFGSHKLPLPGHVLIHGPPGSGKTILARTVAKSLENREDILAHIVFVSCSKLALEKVPVIRQELSNHVTEALNHAPSVVIFDDLDSIISTPDTEGSLPSMSAAGLTDFLVDIMDEYGEKRQKSCGFGPVAFIASIQSLEKIPQSLSSSGRFDFHIKLPAPAASERRAMLKHEIQRRHLRCDDDILLDVAAKCDGYDGYDLEILVDRTVHAAVRRFLPSYASIYEHESPALLREDFSQAMLDFLPVAMRDITKPASDDGRSGWDDVGGLVDIRNAIKEMIELPSKFPKTFAKAPLRLRSNVLLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAASPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQIMKTNGKGILIVGYLLFSYMFFMSSSRPDLLDAALLRPGRLDRLLFCDFPSRNERLEILAVLSRKLPMANDIDLATIADMTEGFSGADLQALLSDAQLAAVHDVLENVDTSRSEKTPVITDALLKFTASKARPSVSEEEKRRLYNIYGQFLDSKRSVAAQSRDTKGKRATLA 1124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04047 1124 FunFam Nuclear valosin-containing protein-like 824 1009 - -
Pste3g04047 1124 Gene3D - 90 169 - -
Pste3g04047 1124 Gene3D - 524 726 IPR027417 -
Pste3g04047 1124 PANTHER AAA-FAMILY ATPASE 230 1096 - -
Pste3g04047 1124 SUPERFAMILY Cdc48 domain 2-like 90 168 IPR029067 -
Pste3g04047 1124 Gene3D - 1002 1081 - -
Pste3g04047 1124 SUPERFAMILY ADC-like 10 85 IPR009010 -
Pste3g04047 1124 Pfam Peroxisome biogenesis factor 1, N-terminal 95 168 IPR015342 GO:0005524|GO:0005777|GO:0007031
Pste3g04047 1124 Gene3D - 827 1094 IPR027417 -
Pste3g04047 1124 SMART AAA_5 575 727 IPR003593 GO:0016887
Pste3g04047 1124 SMART AAA_5 862 1003 IPR003593 GO:0016887
Pste3g04047 1124 FunFam PeRoXisome assembly factor 1002 1077 - -
Pste3g04047 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 1097 IPR027417 -
Pste3g04047 1124 FunFam Peroxisome biogenesis protein 1 532 726 - -
Pste3g04047 1124 FunFam Peroxisome biogenesis factor 1 90 169 - -
Pste3g04047 1124 Pfam AAA+ lid domain 1023 1062 IPR041569 -
Pste3g04047 1124 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 802 IPR027417 -
Pste3g04047 1124 Pfam ATPase family associated with various cellular activities (AAA) 866 998 IPR003959 GO:0005524|GO:0016887
Pste3g04047 1124 Pfam ATPase family associated with various cellular activities (AAA) 579 724 IPR003959 GO:0005524|GO:0016887
Pste3g04047 1124 Gene3D - 727 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04047 Pste-Chr3 35014704 35033181 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04047 579 787 Calmodulin-binding Proteins AT3G56690 30.093 3.79e-10 62.4