Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04012 CAACTAACCAAATCATCGTATAACAGATACACACAGAACAAAAAGGTTTGATACTTTTTTCTAAGACTTCATCAGTTTCCACAAAACACAGACAGAGAAAACAGAAAACGAGAAAAAAAGGTTAAAATTAAAGTCTCGTCGGTTCAAAGTGCACGGTTGGCGGTAGAAATGGAGAGGAAGGAAGCACAAGCACCACTCTCGCCGGCGGCGCGTCCCAGAGCCACCATTCTCCGGCCACGCACCTCCGCAGAGGGCGTATTCAGCGGCGGCGGGTACAGCCCCGGGCCCATGACCCTGCTTTCGACGTTCTTTGGCGACGGCGATGAGTGCAAGTCGTTCTCGGAGCTTCTCGCCGGCGCCAGGGTGGACCCCACCACACCGTTCACGCTTCCACATGGGTTCAGCCCCTCCACCTTTCTTGATTCACCTTCTCAAGGTCAGTTTGGAATGACACACCAGCATATGCTAGCACAAATTACATCTCAGGCTGTGCCACCCCCCTCCAATGTGCAAATCCAAGCTCAACATCCATTCCCTATATCAGCAGTGTCTGCTACCTCATTGACACAGGTTCCTACAGGATCCAGCACTGCACAAAAACTGATATCACTCACAGTGCCAGATTCTAAGATGACAGCAGCATCATTTGATTACTCTCACTCTGAACAAAAGTTGCAGTCTTCTTCTTCTGTTCATGTTGACAAGCCTAATGATGATGGCTACAACTGGAGGAAGTATGGGCAGAAACATGTGAAAGGTAGTGACTTCTCTAGAAGTTATTACAAATGCACACATCCAAAGTGTCCTGTGAAGAAAAAACTTGAGCGTTCTCTTGATGGTCACGTGACTGCAATCATCTATAAAGGAGAGCACAGTCATCAACCTCCAAATCCCAGTAAGCTCACAAAAGACACCACGACTTCAAATGAAAATTCAGATAGTTTGAAAGAAGGGATGGGTTGTAGTCAGGCAACAGGTGAACATGGCTCAGGAACAAGTGATAGTGAGGAAGTTGGTGACCATGAAATTGAAGCAGATGAGAAAAATGATGAACCTGATGCTAAGAGGAGGTCCCAGGATCCAGCCTCTTTACATAGAACTGCTGCAGAGCCTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTAGATGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCCTATCCAAGGAGCTATTACAAATGCACAACCACAGATTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCGACAGATCCTAAAGCTGTTATAACAACATATGAAGGAAAACATAATCATGATGTCCCAGCAGCAAAGACTAATAGCCACACACTTGCCAACAATAATGCATCACAGGCAAAAGCACAGAATGCCATACCCAATAGTGTTACTGGCAATGAGCACAGACCTGTGGCAAGTCTAAGATTGAAGGACGAGCAGCTAACATAGTTTTCTCAGTTCATAACTTAAATATTATATATTTATTTTTTCTCATAGTTCTACATATGCACACCATAGTGTGTTCAGCTCACGACACTAGTATATAACACAACAAGAATGCTCAAATTACTTACAGTTCAAGATTAGCTTAGAAATAAAATATTTTTGTACCTATATTTTTAGTACTAATATTTTTGGCAAAACTTGGATTAGATCTTTATCCTTTCATATTGAGAAATTTGGTTCGCA 1713 0.4349 MERKEAQAPLSPAARPRATILRPRTSAEGVFSGGGYSPGPMTLLSTFFGDGDECKSFSELLAGARVDPTTPFTLPHGFSPSTFLDSPSQGQFGMTHQHMLAQITSQAVPPPSNVQIQAQHPFPISAVSATSLTQVPTGSSTAQKLISLTVPDSKMTAASFDYSHSEQKLQSSSSVHVDKPNDDGYNWRKYGQKHVKGSDFSRSYYKCTHPKCPVKKKLERSLDGHVTAIIYKGEHSHQPPNPSKLTKDTTTSNENSDSLKEGMGCSQATGEHGSGTSDSEEVGDHEIEADEKNDEPDAKRRSQDPASLHRTAAEPRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTTDCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTNSHTLANNNASQAKAQNAIPNSVTGNEHRPVASLRLKDEQLT 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04012 434 MobiDBLite consensus disorder prediction 164 189 - -
Pste3g04012 434 FunFam WRKY transcription factor 165 241 - -
Pste3g04012 434 ProSiteProfiles WRKY domain profile. 181 240 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 MobiDBLite consensus disorder prediction 292 307 - -
Pste3g04012 434 MobiDBLite consensus disorder prediction 164 179 - -
Pste3g04012 434 ProSiteProfiles WRKY domain profile. 323 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 MobiDBLite consensus disorder prediction 411 434 - -
Pste3g04012 434 MobiDBLite consensus disorder prediction 239 276 - -
Pste3g04012 434 MobiDBLite consensus disorder prediction 231 315 - -
Pste3g04012 434 SUPERFAMILY WRKY DNA-binding domain 320 388 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 MobiDBLite consensus disorder prediction 1 33 - -
Pste3g04012 434 SUPERFAMILY WRKY DNA-binding domain 179 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 SMART WRKY_cls 181 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 SMART WRKY_cls 328 387 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 Pfam WRKY DNA -binding domain 329 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 Pfam WRKY DNA -binding domain 182 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 Gene3D WRKY domain 163 241 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 Gene3D WRKY domain 313 389 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste3g04012 434 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 129 408 IPR044810 GO:0003700
Pste3g04012 434 FunFam WRKY transcription factor 33 315 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04012 Pste-Chr3 34132597 34138397 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04012 2 434 WRKY Transcription Factor Family AT2G03340 49.615 5.29e-138 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste3g04012 WRKY 3.7e-25 CL0274