Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03996 TTTAGTTTCACTCAGGCAAGAAAAGAAAGAAGACGAGAGCGGTTGTTTGACACTTTGCGTTGCGCTCTCTTTCTTTCTCTTCCAACGGTCCAACTTTGACTCTCCTTCTTCTTCTTCTTCCCATGGCTTGCCGCATTCCCTAAACCCTAAAAAACCTCAATTTCTGATTAGTTAGTTACTCTCTCCATTTCGCGAGCAACCGTTACCGTTACCATGAACGTGACCATTGATTCCGCGCTCTTCACTTTTCTCTTCCCTTCTCTGTGGGAGATCGAAGTCACCGTGGCCGCCTCCTTCTTCGTCATCATCGCCTATCACTTCTTCGCCGCCCGAACCGCCGTTTACCTCCTCGCCGATCCATCGCTCGCCGACAATTCCGTCGTCGCCGCCGCCGATGTCACCGACGATAAGGACAAGATGGACCTGCCTAAAGTGGATGCTCAAACCAGTTTGGCATACCTGATCAAGTTAGAACTGCTGGCTGCTAAGAATCTTGTTGGTGCAAACTTAAATGGCACATCTGATCCGTATGCTATCATTACATGTGGCAATGAAAAGCGATTCAGTTCCATGGTACCTGGTTCAAGAAATCCAATGTGGGGTGAGGAGTTCAATTTTTCTGTTGATGAACTTCCTGTCCAGATCAATGTCACAATTTATGATTGGGATATAATTTGGAAAAGTGCTGTTCTTGGTTCAGTGACTGTTCCAGTAGAAAGTGAAGGTCAAACTGGTGCAGTATGGCATAGTTTGGATAGCCCATCAGGGCAGGTTTGTCTTCATATAAAAACAATAAAACTATCTGGAAATGCTTCTAGGATAAATGGTTATGGAGGAGTGAACCCTCGAAGAAGGATGTCACCCTTGGAAAGACAGGGCCCCACTGTAGTCCATCAAAAGCCAGGGCCTCTTCAAACTATATTTGATCTTCATCCAGACGAGGTTGTTGATCATAGTTATTCTTGTGCACTTGAGAGGTCATTCTTGTACCATGGTCGTATGTATGTCTCAGCATGGCACATTTGTTTCCATTCCAATGTGTTCTCAAAGCAAATGAAGGTGGTTATTCGATTTGAAGATATAGATGAGATACGAAGGAGTCAACATGCATTTATTAATCCTGCTATAACAATTTTTCTTCGCATGGGTGCTGGTGGACATGGTGTCCCTCCTTTGGGAAGTCCTGATGGTAGGGTCAGATATATGTTTGCATCATTTTGGAACAGGAATCATGCATTCAGAAATCTACATCGTGGAGCAAAGAATTTCCATGAAATGTTGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAGCTTCGTGCACATAGCAGTTCTGTCAGAGGAAGTAAGATGATGGATAAGGTTCCTGAAGAAATCATGCCAAAAACTGGAAAACTTCAACCTTTTATCAAAGAAGAGGCATTAGTCGAGATATACAATGATGTTTTTCCATGCACAGCTGAGCAGTTTTTTAATTTATTATTAAATGATGGTTCAAATTTTACTAGCCAATATCGTTCGGTACGAAAGGATAGTAATCTTGTGATGGGTCAATGGCATACAGCAGACGAATACAATGGTCAAGTCCGAGAGATAACCTTCAGATCCCTTTGTAACAGCCCTATGTGCCCTCCAGACACAGCAATGACAGAGTGGCAACATCATGTTCAATCACCAGACAAGGAAAACTTGGTGTTTGAGACTGTGCAACAGGCACATGATGTTCCATTCGGATCGTACTTTGAGGTTCACTGTAAATGGAGCTTGCAGACAGTTAATGAAAGCTCATGTACTCTGGACATAAAAGTGGGTGCACATTTCAAGAAATGGTGTGTTATGCAATCCAAAATAAAGTCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGCTAGATGTTGCTCGATCGTATATAAAATCTAGTACTTCTAATGACGAGGATGATAAAGCCTCTTCGCCTCCCGCGGCAACCGTGGAAACTTGTGTATCTCCGATGGTAACAAAAACTTATCATAGGTGGGAGTCTGGTGTTTTTTATTTTTCTTCTGGAAACGCTTATGTGGAAAATGAAAATTTCTTT 2085 0.4273 MNVTIDSALFTFLFPSLWEIEVTVAASFFVIIAYHFFAARTAVYLLADPSLADNSVVAAADVTDDKDKMDLPKVDAQTSLAYLIKLELLAAKNLVGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHSLDSPSGQVCLHIKTIKLSGNASRINGYGGVNPRRRMSPLERQGPTVVHQKPGPLQTIFDLHPDEVVDHSYSCALERSFLYHGRMYVSAWHICFHSNVFSKQMKVVIRFEDIDEIRRSQHAFINPAITIFLRMGAGGHGVPPLGSPDGRVRYMFASFWNRNHAFRNLHRGAKNFHEMLEAEKKENAESELRAHSSSVRGSKMMDKVPEEIMPKTGKLQPFIKEEALVEIYNDVFPCTAEQFFNLLLNDGSNFTSQYRSVRKDSNLVMGQWHTADEYNGQVREITFRSLCNSPMCPPDTAMTEWQHHVQSPDKENLVFETVQQAHDVPFGSYFEVHCKWSLQTVNESSCTLDIKVGAHFKKWCVMQSKIKSGAVNEYKKEVDVMLDVARSYIKSSTSNDEDDKASSPPAATVETCVSPMVTKTYHRWESGVFYFSSGNAYVENENFF 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03996 624 CDD C2 84 180 - -
Pste3g03996 624 Gene3D C2 domain 65 197 IPR035892 -
Pste3g03996 624 ProSiteProfiles C2 domain profile. 63 180 IPR000008 -
Pste3g03996 624 Pfam VAD1 Analog of StAR-related lipid transfer domain 407 552 IPR031968 -
Pste3g03996 624 Gene3D - 232 351 IPR011993 -
Pste3g03996 624 PRINTS C2 domain signature 144 152 IPR000008 -
Pste3g03996 624 PRINTS C2 domain signature 99 111 IPR000008 -
Pste3g03996 624 PRINTS C2 domain signature 123 136 IPR000008 -
Pste3g03996 624 SMART gram2001c 231 297 IPR004182 -
Pste3g03996 624 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 82 193 IPR035892 -
Pste3g03996 624 SMART C2_3c 83 179 IPR000008 -
Pste3g03996 624 Pfam C2 domain 85 179 IPR000008 -
Pste3g03996 624 ProSiteProfiles VASt domain profile. 403 573 IPR031968 -
Pste3g03996 624 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 5 584 IPR044655 -
Pste3g03996 624 Pfam GRAM domain 234 300 IPR004182 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03996 Pste-Chr3 33818150 33838633 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03996 72 168 C2H2 Transcription Factor Family AT4G21160 23.711 3.83e-07 50.8