LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g03993	GCCAACCAGCCCTCTCTTTCTCTTTCTCTCATCATCATCATCATGGAACCAAAAGAAAGTAAAATTATAAATCCCACAAAACAAAGAAAATTATAAATCTCACAAAAGGTGAAAGGTGGCTAGAGGAAAAGTAACTTGACACAGCCCAAGGGAATTGGATTCTGAGCTCTAGAGATAGAGAGAGATATTAATTGAGAAAGTTTTTGCCAGCCAAGGAGGAAGAATCATGTGGTGCTGGAAAGGAGAGGGAGGCTAGAAAAAGAGCTAGAGAGAGGGTACCCTCTTCCTTGCACAGTTCTGTGCCTGTTTCAGTTTCTGTTGCAACACTTTTAGGTGTTCTTATAGCAACCCCTGCCTACCAACAAGGAAGAAACAGTAATGCTACTGACATGGGAAAGAAAGGGAGTTGGTTTTCTGCAATCAAGAGAGTTTTCACACACCACTCCAAGGGGAAGGATTCAGATAACAAAGACACCAAAGAGAAGAAGAAAGGCGTAGGAAAAAGGCATGGAGAGACCAATTCATTCATCCCCCTTTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGACTTTGAAAGGGAACAACAACTACTAGGATTAAGGCCTGCCACTCCTACTGAGAGACCAAAATCACCACCTTATGTCCCTCCAAGAGCTCCTTCTCCTAGGCCTCCTTCTCCAAGGCCTCCCTCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCAAGGGCGGCTTCTCCACGAGTTACCTCTCCCAAAGCTACATCTTCCCGGAATACACATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTTTGAGGCAACAGCATGCCTCAGCTACTAAGATCCAAGCTGTTTATAGAGGTTATATGGTCAGAAGGAGTTTTAGAGCTTTAAAGGGTCTGGTGAGGCTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAAACAGTAAATGCCATGAAACACATGCAGCTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAAGCAAGATATCAAGCTGAGTTCAAGAATGATAAGGACACAGCCAGTGCATTGGGCAAACTCACTTCTGAAGCAGGCAATGAAGAGTGGGATGATAGCTTACTGACAAAAGAGGAAATAGAGGCAAGATTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCCCATCAGCTATGGAAAGCCACTCCAAAATCAACTCACACCCCCGTGATGGATACACGATCAGGTGGATTCCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGAAGGAACTCCCCAAGAAAAACAAGTCTTGAAGAATTTTCAAATCACACCTCCAAGACCATACTCTGAGCAAAAGACTAGTCCAAGACCTGGCTCCAGCACTCAAAGGCAACAGCAGCAGCAGCCTCAGTTTTCCTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTGACATCTTCAAAACCGGTGAGAACACCCCCATTTAGAACTCCTCAGGCAAACAGCTCAGGCTCAGGCTCTAAATTTCCAAGACCAAGGGGTGTGGTGGGAGCCAATTCACCTTTTGATGTGCCACTAAAGGATGATGAGAGTCTCACAAGCTGCCCACCATTTTCAGTGCCAAATTACATGGCTCCAACCCTCTCTGCCAGGGCTAAAGTACGTGCAAATAGTAATCCTAGAGAAAGGCTTGGTGGGACTCCAACAAGTACTGATTCAAAGAGGAGACTCTCATTCCCTTTGTCACAAGGAATTGGATCTTTCAAATGGTCTAAAGGGTTGTCAAGCAAGGATCAAAGGGTGCCAGATAAATTTCAGTCACTTGAATCTATAGGAAACGTGAGTGTGGATTCAACAGTGTCTTTGCCTGCAAGGGTGGGAAGAAAGCCTTTTACAAGATTTGTGTGATTTATTCTTTTTTAACCATTTTATTTTGTCCATGTTGGTGGTGTTATCAGTTACATTATGGTTATGATTTGAGTGCATTGGTGATAGTTTGATGACAGGTATACCCGTTGTAAACTAATAAAACCATAATAGGAAAATGATGGTTTGGT	2128	0.4422	MGKKGSWFSAIKRVFTHHSKGKDSDNKDTKEKKKGVGKRHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPATPTERPKSPPYVPPRAPSPRPPSPRPPSPRPPSPRAASPRAASPRVTSPKATSSRNTHHHKEVGYRPEPTLRQQHASATKIQAVYRGYMVRRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDTASALGKLTSEAGNEEWDDSLLTKEEIEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSTHTPVMDTRSGGFPWWWNWLERQAPEGTPQEKQVLKNFQITPPRPYSEQKTSPRPGSSTQRQQQQQPQFSFDNMDTPTPKSTKSTIVTSSKPVRTPPFRTPQANSSGSGSKFPRPRGVVGANSPFDVPLKDDESLTSCPPFSVPNYMAPTLSARAKVRANSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGLSSKDQRVPDKFQSLESIGNVSVDSTVSLPARVGRKPFTRFV	529

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g03993	529	SMART	iq_5	148	170	IPR000048	GO:0005515
	Pste3g03993	529	Pfam	Protein of unknown function (DUF4005)	404	481	IPR025064	-
	Pste3g03993	529	Gene3D	-	130	169	-	-
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	1	152	-	-
	Pste3g03993	529	PANTHER	IQ-DOMAIN 5-RELATED	1	476	-	-
	Pste3g03993	529	Pfam	IQ calmodulin-binding motif	150	170	IPR000048	GO:0005515
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	448	471	-	-
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	329	402	-	-
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	16	40	-	-
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	456	471	-	-
	Pste3g03993	529	ProSiteProfiles	IQ motif profile.	149	177	IPR000048	GO:0005515
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	329	416	-	-
	Pste3g03993	529	MobiDBLite	consensus disorder prediction	78	113	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g03993	Pste-Chr3	33716719	33722954	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g03993	1	529	IQD Protein Family	AT3G59690	49.653	9.07e-165	476