Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03975 ATGACGTCTCTCTTCTCTTTCTCTTTCTACTTCTCCTTCTCCTTCTCGTCTTCCTCTTCCCTCTTCCCTCTTCCACCCCACCTGTCTCTCTCTTCTCATTCTCTCATCACTTCCTTAACTCATTATTCTCCTTCATCATGTTTACACCCTTCAACATTCTTCTCTTTTTCTCACTCTTGTTCACTTGCTGTTTTTCTTCTTCTTTTTCACACCTTCCTCGCCGTGTTCTTCATCAGCCACTCTTCCCGAGAATCTCTCTCCCTCCATCACAAGCTCCAACTTTACCACCTCAATCTCCACCAAAGCAACAGCAACAACCTAAGCTTCCATTTTCTTCTTCTTCATCTTCTTCACCACCACCGCCACAGAAACCTTTCTTCCCTTCTTACCATTCCCCTCCTATCCCTCCCTCCCCCGCCGTCGTCGCCACCTTCCCCGCCAACATCTCCTCCCTCCTCCTCCCTCTTTACACCCGCCACCACCGCTCCGCCGCCGTACTCGCCGTCTCCCTCTCCTCTTCTCCTAGCCCTCCTCGCCGCCGCCGCCTTCCTCCTCCACCGCCGCCGCAACCACTCCTCCCTTCCCGACGACAAGGCCTCCAGATCAGACAGCCTCCGCCTCTTCCCGCCCAACACCGCCGCCTCCGACGGCCTCGATAGAAAACCCCGCGGCAAATCCAGTCCCACATCGGAGCTTCTCTACCTCGGCACGGTGGCGAACTCAGTAACCACCCCCACCACCCCCACCATAACAACCACAACAGACTCAAGCTCCGGCCACAACGAAAACTTCCGGCCACCGTATCAAAAACTCGGCGACTCGCCGGAGCTGAACCCGCTTCCGCCACTGCCTCGTCACAAATTCAAACCATGGACAACGAGTGAAGATGAAAATGTTAAACACGTGAAACAAAACGAAGAGCAACAAAAAGAAGAACTTGAAGGAGAAGAAGAAGAAGAACAGTTTTTTTCTCCAAGAAGTTCCTCTGGTGGGAACATTAACATTAACAAACAACAAATGAGTCCTCCTTCTCCTTCTCCTCTTGCTGCTTATGCTGTTGCTGCTTCAAGCTCACGTGTTTTCCACGTGGATAAATTCGGTTCTAGAAGCTTCACTTCTCGAACCCCTTCTTACCCTCAATCAAATTCCCTCTCTTTATCGCGTTCTCCATCTCTTAATTTCAGCCCCGCAAGTGTTAAATCATTGCCTCCCAACAACCCTGCTTCTCCTTCTTTTTCTTCATCTTCTTCTTCTCCAAGGGAAGAATGGCATGCTTCTTCAACTCAAGGGAAGGATTCTCCGGCGACCACCACTTTACCTTCACCACCGCCGCCACCTCCTCCGCCTCCGCCGCCTCGGTTCTGGGAGACCCCGGTTGTTGAGAATGTTACTATTAGGCAGAGCGAGGAGACCCAGAAGCCAAAGTTGAAAGCTTTGCATTGGGATAAAGTTAAGGCCAGCTCGGACAGGGTTATGGTTTGGGATCGATTGAGACCAAGTTCTTTTCAGTTGAACGAGGACATGATTGAAACACTTTTTATGGTAAATAATAATTCCAAGGAGGGTTTCGGGGTTGCTATTAGAGATAATGCTCGCCGTCAAATAGTTCATTCAGCTTCTCCTATGCCACTGGAAAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCGTTAAATGTGACTATTGATGAAGTTTGTGACGCCCTCAGGGAAGGTGATGCTTGA 1743 0.5014 MTSLFSFSFYFSFSFSSSSSLFPLPPHLSLSSHSLITSLTHYSPSSCLHPSTFFSFSHSCSLAVFLLLFHTFLAVFFISHSSRESLSLHHKLQLYHLNLHQSNSNNLSFHFLLLHLLHHHRHRNLSSLLTIPLLSLPPPPSSPPSPPTSPPSSSLFTPATTAPPPYSPSPSPLLLALLAAAAFLLHRRRNHSSLPDDKASRSDSLRLFPPNTAASDGLDRKPRGKSSPTSELLYLGTVANSVTTPTTPTITTTTDSSSGHNENFRPPYQKLGDSPELNPLPPLPRHKFKPWTTSEDENVKHVKQNEEQQKEELEGEEEEEQFFSPRSSSGGNININKQQMSPPSPSPLAAYAVAASSSRVFHVDKFGSRSFTSRTPSYPQSNSLSLSRSPSLNFSPASVKSLPPNNPASPSFSSSSSSPREEWHASSTQGKDSPATTTLPSPPPPPPPPPPPRFWETPVVENVTIRQSEETQKPKLKALHWDKVKASSDRVMVWDRLRPSSFQLNEDMIETLFMVNNNSKEGFGVAIRDNARRQIVHSASPMPLENRVLDPKKSQNIAILLRALNVTIDEVCDALREGDA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03975 580 ProSiteProfiles Formin homology-2 (FH2) domain profile. 466 580 IPR015425 -
Pste3g03975 580 MobiDBLite consensus disorder prediction 368 456 - -
Pste3g03975 580 Pfam Formin Homology 2 Domain 467 580 IPR015425 -
Pste3g03975 580 PANTHER FORMIN-RELATED 68 579 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste3g03975 580 MobiDBLite consensus disorder prediction 368 436 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 289 310 - -
Pste3g03975 580 Gene3D Formin, FH2 domain 460 580 IPR042201 -
Pste3g03975 580 MobiDBLite consensus disorder prediction 192 230 - -
Pste3g03975 580 Coils Coil 296 319 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 242 264 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 242 350 - -
Pste3g03975 580 SUPERFAMILY Formin homology 2 domain (FH2 domain) 442 579 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 324 345 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 138 168 - -
Pste3g03975 580 MobiDBLite consensus disorder prediction 437 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03975 Pste-Chr3 33429242 33431515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03975 196 580 FH2 protein (formin) Gene Family AT2G43800 34.293 4.08e-41 157