Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03974 ATGCTGTCTATAGGCAATTGTGATACATTGGGAACAGAACTTCTTGAAAGTTTGTTAAAGATGGCTCCAACTAAAGAAGAAGAATTTAAGCTGAAGGAGTTTCAAGATGAATCGCCGTTCAAGCTTGGTCCAGCTGAGAAATTTCTCAAAGCTGTGCTTGATATACCTTTTGCGTTTAAGAGAGTGGATGCTATGCTCTATATTGCAAATTTTGATTCAGAATTAGAATATCTTAAGAAGTCCTTTGAAACTCTGGAGGTGGCCTGTGACGAATTAAGGAAGAGCAGAATGTTTTTGAAGATACTTGAAGCAGTGCTGAGAACTGGAAATAGAATGAACATTGGCACCAATCGAGGTGATGCTCATGCATTCAAACTGGACACGCTCTTGAAGTTAGTTGATATTAAAGGAACAGATGGAAAGACCACTCTCTTGCATTTTGTTGTACAGGAAATTGTCAGAACTGAGGGTTCTCATATTTCTGGTTCTAATAATCATCATGCTTCTGACAATGGCCACCAATATACTCTTCAAGATGAGGTTGACTTCAAAAAGCTTGGCCTGCAAGTTGTTTCAGGTTTGAGTGGGGAGCTCACCAATGTTAAAAAAGCAGCTGCTATGGATTCAGACGTGCTCGGTAGTGATGTTGCCAAGCTTGCCAGAGGAATAGAAAGAGTTGTGCAAGTTGTAAAATTGAACGAGGAGTCACCTTTGAAAGAAACTAACCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAGGGGAGACCAAGAGATTTTAAAAATCCAGGTCCAAGAGAAAAAATCCCTCTCTTTAGTAAAGGAGATAACTGAGTATTTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCATTTAGAATTTTTATGGTTGTGAGGGATTTCCTTTCAATACTAGATGGTGTTTGCAAAGAAGTTGGTAAAGTAAATGAAAGAACTTTGGTTGGTTCCCGTCAGTCTGTAATGCCTGCAAATCCTATGATGCAAACCTTTTTCCCTGAGATTATTGTTAAGCAGTCATCTGCTTCTTCTGAATCTGATTAACCTCTCAAATCCAATCTTGGCCCGGTTGTAAGAGATTGAAGTTGGTTGCACATGTTTTGGTCTATGATGGGTTTGGACTTTTATCATCCAAAGGCTATCATGTGAAATGACATTTTCACTCAAACCCCACTGAACTAAACACCCAGCTTTACCCCTACCTCATGATGAAGAAAAGCTCTTACTACCACAGCTCTTGTTTTCTTGCCTATATAGCTCTGTATATGTTTTACTACCTAGATTATATAATGAGTACATTTTTTCTCCCTTTGTGCTAGGTTGGCTGCTTCTATATATTTGTATTCATAAATAATGAGTGATAAATTTTGGATTTTTTCCCCTAAGCTTCTGTAAGTTGAGAAATGTGATTTGTGAATAAGTTGAAATTACTAATACACTAGTTGTGACGGGACACCATAATAGTTGTTCAATTGTCA 1499 0.3803 MLSIGNCDTLGTELLESLLKMAPTKEEEFKLKEFQDESPFKLGPAEKFLKAVLDIPFAFKRVDAMLYIANFDSELEYLKKSFETLEVACDELRKSRMFLKILEAVLRTGNRMNIGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNNHHASDNGHQYTLQDEVDFKKLGLQVVSGLSGELTNVKKAAAMDSDVLGSDVAKLARGIERVVQVVKLNEESPLKETNQKFSEAMKGFLERGDQEILKIQVQEKKSLSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSILDGVCKEVGKVNERTLVGSRQSVMPANPMMQTFFPEIIVKQSSASSESD 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03974 354 PANTHER FORMIN-RELATED 5 344 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pste3g03974 354 SMART it6_source 1 321 IPR015425 -
Pste3g03974 354 SUPERFAMILY Formin homology 2 domain (FH2 domain) 6 320 - -
Pste3g03974 354 Gene3D Formin, FH2 domain 1 332 IPR042201 -
Pste3g03974 354 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 332 IPR015425 -
Pste3g03974 354 Pfam Formin Homology 2 Domain 4 306 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03974 Pste-Chr3 33426397 33429034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03974 5 343 FH2 protein (formin) Gene Family AT3G25500 67.647 8.91e-161 475