Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03938 CCTCATCATGTCTTCTTCCAACAGACACTGGCCAAGTATGTTCAAATCCAAGCCTTGCAATCCCCACAACCAATGGCAAAATGACATCAACTCCTCTCTCATATCCACTGGATGTCAAAGAAGCCCTTATAATTCAGCTGCAGGAGGGGAAGACAGAACTCCTGAACCAAAGCCGAGATGGAACCCAAAACCGGAACAAATTCGTATTCTGGAAGCCATCTTCAACTCTGGGATGGTGAATCCTCCGAGAGATGAGATCAGGAAGATCAGGTTGCAGTTGCAAGAGTATGGTCAAGTGGGTGATGCTAATAATCGTAAATCTAGAAGCAAGCACAAACTTCGGCACCTCCAAACCCCAAAGAAAATAAATTCAGAAGCACAACAAAACACTGCTTCTCTCTCTCAGATCACACTGCCATCATCCTCATCCTCTTCTTCAGACAAATCCTCTTCAAAAGAATTTGTATACCCCAATGGATTCTCCTTTGGCTTCTCACATGTCAATGATGCAGTGCCTAATTCTCCCACCACTTCTATTAATCAGACTTATTTTCAGCCTCAGAATCACAATGAAATCAATTTGTTACCACCAATGGCTGACTCTTTCTACTTTCCCATGCACAATAATGGACAAGGTGGATTAGTTAATAACGCCACATCATCGCTTGGGTTTTCTGTTCCTCAGTTCTCCAACAGTGTGCTGCAATCTCAACCTCAGTGTGAACAAAATGTTGGACCTTGCACTAGTCTTCTGCTTAATGAGATGATGAACCAAGACATCTTCTCAAAGAATGACCAAGATCAACTCAAGGCATCGAAAACAATGCGCCAAAACTCACAACTTAGTTTTTCTTTTGCTCCAACTACAACCATTGTCCCTTCCATCTCTACTGTTCCTTGTCCCATCACTCAACATCAAGGTGTTGGTGAGGTTGCAGCAAATAGGGCAAAATGCACAGTGTTCATCAACGATGTCGAATTCGAGGTTATGATGGGGCCCTTCAACGTGCGTCAAGCTTTTGGAGAAGAAGCCGTGCTAATCCATTCGTCTGGTAACCCTGTTCCTACTGATGAGTGGGGCATCACCCTCCACCCCCTGCAGCATGGTGCTTATTACTATCTGATTTAC 1129 0.4402 MSSSNRHWPSMFKSKPCNPHNQWQNDINSSLISTGCQRSPYNSAAGGEDRTPEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRLQLQEYGQVGDANNRKSRSKHKLRHLQTPKKINSEAQQNTASLSQITLPSSSSSSSDKSSSKEFVYPNGFSFGFSHVNDAVPNSPTTSINQTYFQPQNHNEINLLPPMADSFYFPMHNNGQGGLVNNATSSLGFSVPQFSNSVLQSQPQCEQNVGPCTSLLLNEMMNQDIFSKNDQDQLKASKTMRQNSQLSFSFAPTTTIVPSISTVPCPITQHQGVGEVAANRAKCTVFINDVEFEVMMGPFNVRQAFGEEAVLIHSSGNPVPTDEWGITLHPLQHGAYYYLIY 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03938 374 CDD homeodomain 54 110 IPR001356 GO:0003677
Pste3g03938 374 MobiDBLite consensus disorder prediction 118 148 - -
Pste3g03938 374 MobiDBLite consensus disorder prediction 98 148 - -
Pste3g03938 374 MobiDBLite consensus disorder prediction 1 41 - -
Pste3g03938 374 MobiDBLite consensus disorder prediction 1 62 - -
Pste3g03938 374 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 373 IPR044557 GO:0003700|GO:0050793
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03938 Pste-Chr3 32920952 32923113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03938 1 373 Wox Gene Family AT2G33880 42.721 1.35e-78 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pste3g03938 None None None