LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g03934	CGATGAAGAAGGTTCCCAAGAGCAGCTGCAAGTCAGCATCACACAGGCTCTTTAAGGACAAGGCAAAGAACCGTGTGGATGACTTGCAGCTGATGTTCCTGGATCTGCAGTTTGCTAGGAAGGAGAGCCGCACGGTTGATGCTGCAGTGCTGGAGGAACAAGTCCATCAAATGCTTCGTGAGTGGAAGGCCGAGCTCAATGACCCCTCACCTGCTTCTTCTCTGCAGCAAGGTGGCAGTCTTGGGTCATTCTCTACGGACATCTGTCGGCTATTGCAGCTTTGTGAGGAGGAAGATGATGCCTCCAGTCCATTAGCTGCTCCTAAGCCTGAACCCAATGACCATACAATGCAGGCTGGGGGTAAGGTCATCTTCCTAGAGATTCACGTTTTTCTCCAAAAGCCAGTATCTGCTTTTACACATTGTACTTTTATCCAGTATTTCAATACTGGTATGGTTTCAATATTGGATTTCATCTTAGATTGTAATAAGTTTCCTGGTTTAACTGTAAATCAGGGCCAACAGCAACATGATTTCCCATTGGTTGATGAGTGCAAACATTCCACCTCAAGTGTTCATAATGTGGCAGCTAACAACCCGGATGGGCATGCTTTAGAATATCATCAGTTTGATTTGCATCAGGACTATGATCATGGTTATAGTGAGGAGGATGCTATTCCTCATATATCTAGCTACCTTCCAAGTATCTGCCCTCCTCCTTCTGCTTTCTTAGGCCCAAAATGTGCACTTTGGGACTGTCCAAGGCCTGCACAAGGGTTGGACTGGTGTCAAGACTATTGCAGTAGCTTTCATGCTGCCCTAGCTTTGAATGAAGGGCCTCCAGGCATGGCCCCAGTTCTACGACCTGGGGGCATTGGATTGAAGGATAATTTACTTTTTGCTGCTCTTAGTGCAAAAGCACAAGGAAAAGATGTTGGCATCCCAGAATGTGAGGGAGCGGCCACTGCAAAGTCTCCCTGGAATGCACCTGAGCTCTTTGATTTGTCTGTTCTTGAGGGTGAGACTATTAGGGAGTGGCTCTTCTTTGATAAGCCTCGAAGAGCATTTGAGAGTGGAAACAGAAAGCAAAGGTCATTGCCAGATTATAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAATTTGGAGGGCTTAAGAGATCCTATTATATGGATCCCCAACCACTGAACCATTTTGAGTGGCACCTTTATGAATATGAGATTAACAAGTGTGATGCATGTGCCTTGTACCGATTGGAACTGAAGCTTGTTGATGGTAAGAAGAACTCCAAGACAAAGGTAGCAAATGATTCAGTTGCTGATCTGCAGAAGCAGATGGGAAGGCTCTCTGCTGAGTTTCCACATGACAACAAAAGGGCTGCCAAAGGCAGAGCCAAAATTAATGCCAAAGTTGGCATAGGCGGTGTCTATTCAGCTTCACACAGAGTGACTCCTCTGAATGGAACGTATGAGTATGGGTTAGCTGCACCATATGACTATCTTGTTGAGAACATGGGCGACTACTATGGGACA	1541	0.4594	MKKVPKSSCKSASHRLFKDKAKNRVDDLQLMFLDLQFARKESRTVDAAVLEEQVHQMLREWKAELNDPSPASSLQQGGSLGSFSTDICRLLQLCEEEDDASSPLAAPKPEPNDHTMQAGGKVIFLEIHVFLQKPVSAFTHCTFIQYFNTGMVSILDFILDCNKFPGLTVNQGQQQHDFPLVDECKHSTSSVHNVAANNPDGHALEYHQFDLHQDYDHGYSEEDAIPHISSYLPSICPPPSAFLGPKCALWDCPRPAQGLDWCQDYCSSFHAALALNEGPPGMAPVLRPGGIGLKDNLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKCDACALYRLELKLVDGKKNSKTKVANDSVADLQKQMGRLSAEFPHDNKRAAKGRAKINAKVGIGGVYSASHRVTPLNGTYEYGLAAPYDYLVENMGDYYGT	513

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g03934	513	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	508	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g03934	Pste-Chr3	32870419	32873003	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pste3g03934	3	511	VOZ-9 Transcription Factor Family	AT1G28520	65.094	0.0	677

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Pste3g03934		None	None	None