Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03923 AAAAAACAATAATGGGTTTCTATAGCAGTGGCAGTGAAAAGAGCGAAGCCTATGACGCGCAAATCCATTTGTACAAACATGTGTACAACTTTGTGAGCTCGATGGCTCTGAAGTCTGCTATGGAATTAGGCATAGCAGATGTTATGGACAGGCAGGGCAAACCCATGACCCTTGGTGAGTTGTCCTCTGCTCTCAAACTGCATCCTTCAAAAGTTAGTGTGCTTCACCGTTTCCTGCGCCTTCTAACTCACAACGGCTTCTTCACTAAAACAACTCAGAAGGGTAAAGAAGGAGGAGAAGAAACAGTCTATGATCTTACTCCTCCTTCGAAGCTTCTTATAAGAAGCAAGACAACATGTTTGGCACCTATTGTTAAGGGAGCGCTTCACTCAAGCTCCCTTGACATGTGGCACTCTTCTAACAAGTGGTTCACTGAGGATAAGGAACTCACACTTTATGAGAGTGCATCTGGGGAGAGTTTCTGGGACTTTCTCAACAAAGCCTCTGAACCTGACACACTTACCATGTTTCATGATGCCATGGCTGCAGATTCTCAAATGTTCAAACTTGAACTCAAAGAATGCAAACATGTGTTTGAGGGATTGGGTTCCCTTGTCGATGTCGGAGGTGGACTGGTGCTCCTCACTGAAGCCTTCCCTCACTTGAAATGCACTGTTTTTGACCTACCACACGTTGTGGCTAACCTCAATGGAACTGAAAATTTGAACTTTGTTGGTGGAGACATGTTCAAGTCCATCCCCTCTGCCGATGCCGTTTTACTCAAGTGGGTCTTGCACGATTGGAACGATGAGCTCTCGGTGAAAATATTGAAGAATTGCAAAAAGGCTATTTCAGGAAAAGGAAAAGAAGGAAAAGTGATAATAATAGATATAGTGATTGATGAAACAAGTGATGATCGAGAATTGACTAAGTTGAAACTAGACTATGACTTGGTGATGTTAACTATGTTCAATGGGAAAGAAAGAGAAAAGAAAGAGTGGGAGAAACTCATATACGAGGCGGGTTTCAGCAGCTACAAGATTACCTCTATATGTGGCTTCAAATCTCTAATTGAAGTTTATCCTTAATTTATTAGAAGCTATATTGTAAGCAATATGTGCTCCTATACATGCTGTGGCATTTTTTTTTTTGGCATGATGTTTAGTGTTTTGATAAAAAAGAAGCTAAGACATATAAATAATATTTAGATTTTATAATAAAATAT 1225 0.4041 MGFYSSGSEKSEAYDAQIHLYKHVYNFVSSMALKSAMELGIADVMDRQGKPMTLGELSSALKLHPSKVSVLHRFLRLLTHNGFFTKTTQKGKEGGEETVYDLTPPSKLLIRSKTTCLAPIVKGALHSSSLDMWHSSNKWFTEDKELTLYESASGESFWDFLNKASEPDTLTMFHDAMAADSQMFKLELKECKHVFEGLGSLVDVGGGLVLLTEAFPHLKCTVFDLPHVVANLNGTENLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKKAISGKGKEGKVIIIDIVIDETSDDRELTKLKLDYDLVMLTMFNGKEREKKEWEKLIYEAGFSSYKITSICGFKSLIEVYP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03923 358 PIRSF O-mtase 4 358 IPR016461 GO:0008168
Pste3g03923 358 Gene3D - 4 109 IPR036388 -
Pste3g03923 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 357 IPR029063 -
Pste3g03923 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 358 IPR016461 GO:0008168
Pste3g03923 358 Pfam Dimerisation domain 31 79 IPR012967 GO:0046983
Pste3g03923 358 FunFam Coniferyl alcohol 9-O-methyltransferase 4 109 - -
Pste3g03923 358 Gene3D Vaccinia Virus protein VP39 111 358 IPR029063 -
Pste3g03923 358 Pfam O-methyltransferase domain 133 340 IPR001077 GO:0008171
Pste3g03923 358 FunFam O-methyltransferase ZRP4 112 358 - -
Pste3g03923 358 SUPERFAMILY "Winged helix" DNA-binding domain 11 112 IPR036390 -
Pste3g03923 358 PANTHER O-METHYLTRANSFERASE 16 343 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03923 Pste-Chr3 32655213 32656937 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03923 28 356 Monolignol Biosynthesis Gene Families AT5G54160 33.929 2.24e-51 173